Shinella sp. HZN7: shn_17310
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Entry
shn_17310 CDS
T04278
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_17310
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
shn_17310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
MarR
HTH_30
MarR_2
Fe_dep_repress
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANH05623
UniProt:
A0A1A9G5R8
LinkDB
All DBs
Position
3597668..3598534
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AA seq
288 aa
AA seq
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MAIVFTHLRSFHAVAENRGFTAAADALNISQPTVTTQVKELEERYGVELIVRRGRRIELS
ETGAALFDVTKRIMTLHEEAEELLLSSGKLETGMLRLAAVGPFHATEMVARFLAKYPSIK
VSMLLGNSDQTLQRVLDLESDVAILAHAVDDPRIASVPFSTHDVVVFVNVEHPWYGRDEV
SITELAGQPLILREVGSTTRRALEQAALKANVPVRPFLEIGSREGVWKAVERGLGIGVVA
DFEFVAHPRLGTIRFSDAVVQTEYRLSCLLERRHSPKIEAFMKSVLTP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggctatagtattcacgcatctccgctccttccacgccgtggctgaaaaccgcggcttc
accgcggccgcagacgccctcaacatcagccaaccgactgttaccacacaggtaaaggag
ttggaggagcgttacggcgtcgagctgatcgtgcgccgcggacggcgcatcgaactctcc
gagacgggggcggcgctcttcgacgtgacgaaacgcatcatgacgctgcatgaggaggca
gaggagcttctgttgagcagcggcaagctcgaaaccgggatgttgcgccttgccgccgtg
gggccgttccatgcgacggagatggtcgcgcggtttcttgcaaaatatccctcgatcaag
gtcagcatgctgctcggcaactccgaccagaccctgcagagggttctcgatctggaatcc
gacgtcgccatcctggcgcatgccgtggacgatccgcggatcgcatccgtgccgttcagc
acccacgacgtcgtcgtcttcgtcaatgtcgagcatccctggtacgggcgcgacgaggtc
tccatcacggaactcgccggccaaccgctgatcctgcgggaagtgggatcgacgacgcga
cgcgctttggagcaggcggccctgaaagcgaatgtcccggtcaggcccttcctcgaaatc
ggcagccgcgaaggcgtctggaaggcggtcgagcgggggctcggcatcggcgtcgtcgcc
gatttcgaattcgtggcgcatccgcgcctcggcacgatccgcttttccgatgccgtggtg
cagaccgaatatcgcctctcctgcctcttggaacggcgccattcgccgaagatcgaggcc
ttcatgaagtcggttctcaccccgtaa
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