Shinella sp. HZN7: shn_17620
Help
Entry
shn_17620 CDS
T04278
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shz03036
]
shn_17620
Chromosome and associated proteins [BR:
shz03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
shn_17620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
HTH_32
Motif
Other DBs
NCBI-ProteinID:
ANH05667
UniProt:
A0A1A9G3B9
LinkDB
All DBs
Position
complement(3666760..3667707)
Genome browser
AA seq
315 aa
AA seq
DB search
MRDPSALQVESFLEMMSAERGAATNTLQSYERDLADARSFLNERSVRLVEATADDLRAYL
AHLARQGFAASSQARRLSALRQFFKFLYGEGLRGDDPTGILDAPRKGRPLPKTLSVEDVG
RLIDRAETEAAEPGDTLLQRRRMHLLVELLYATGLRVSELVSLPASVLAQTGRFLVVKGK
GNKERLVPLSRAAVAALETYGEALAADIGDDPAAGAFLFPAKSKEGHLPRQVFARDLKAL
AGRAGIRASTLSPHVLRHAFASHLLQNGADLRAVQELLGHQDISTTQIYTHVLEERLHQL
VQTHHPLAKQAKKPD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagggatccatccgcccttcaggtcgaatcctttctcgaaatgatgagcgccgagcgc
ggcgcggcgacgaacacgctgcagtcctacgagcgggacctcgcggatgcgcgctccttc
ctcaacgaacggagcgtgcgcctggtggaggcgacggcggacgacctgcgcgcctatctc
gcccatctcgcccggcagggctttgccgcctcctcgcaggcccgccggctttcggcgctg
cggcagttcttcaagttcctctatggcgaggggctgcgcggcgacgacccgaccggcatt
ctcgatgctccccgcaagggccggccgctgccgaagacgctgagcgtcgaggatgtcggc
cgcctgatcgaccgggcggagacggaggcggcggaaccgggcgacacgcttctccagcgc
cgccgcatgcatctcctggtggagcttctctatgcgacgggcttgcgcgtcagcgaactg
gtctcgctgccggcgagcgtgctggcgcagacgggtcgcttcctcgtcgtgaagggcaag
ggcaacaaggagcggctggtgccgctgtcgcgcgccgccgtcgcggccctcgaaacctat
ggcgaggcgctggcggccgatatcggcgacgatccggcggcgggcgccttcctgtttccg
gcgaagagcaaggagggccatctgccgcgccaggtgttcgcgcgcgacctgaaggcgctg
gcggggcgggcgggaatccgcgcctcgacgctctcgccgcatgtgctgcgccatgctttc
gccagccatctcctgcagaacggcgcggatctgcgcgcggtgcaggaactcctcggccat
caggacatttcgacgacacaaatctatacgcatgtgctggaagaacggctccaccagctc
gttcagacccatcacccccttgccaaacaggcaaaaaaaccggattag
DBGET
integrated database retrieval system
