Shinella sp. HZN7: shn_17755
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Entry
shn_17755 CDS
T04278
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00300
Lysine biosynthesis
shz00470
D-Amino acid metabolism
shz01100
Metabolic pathways
shz01110
Biosynthesis of secondary metabolites
shz01120
Microbial metabolism in diverse environments
shz01230
Biosynthesis of amino acids
Module
shz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
shn_17755
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
shn_17755
Enzymes [BR:
shz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
shn_17755
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FBPase_glpX
DUF6003
Motif
Other DBs
NCBI-ProteinID:
ANH05689
UniProt:
A0A1A9G5Y4
LinkDB
All DBs
Position
complement(3691773..3693041)
Genome browser
AA seq
422 aa
AA seq
DB search
MNHFEHRDGILHAEDVPIPEIAKAVGTPFYVYSTATLERHYKVFSKAFDGVDAMVCYAMK
ANSNQAVLKTLARLGAGIDVVSEGELRRALAAGVPASRIMFSGVGKTPREMDLALEAGIY
CFNVESEPELEVLNARAVKAGKVAHVSFRINPDVDARTHAKISTGKKENKFGISWERARA
VYARAASLPGIKVTGIDMHIGSQITELQPFEDAFKLLRELVDTLRADGHTIDHVDVGGGL
GIPYKTDNAPPPLPDAYAEIVKNQLKGLDCKIVTEPGRLIVGNAGILVTEVIYVKDGGEK
TFVIVDAAMNDLIRPTLYEAWHEIQPVVISAASAPRIRADVVGPVCETGDYLAQDREMAQ
PKPGDLIAVGSAGAYGAVQAGTYNSRLLVPEVLVNGSRFHVVRPRLTYDDLIGLDSVPDW
LV
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttcgagcatcgcgacggcatcctccatgcggaggacgtgccgattcccgaa
atcgccaaggccgtcggcacgcccttctacgtctattcgacggccacgctggagcgccac
tacaaggttttctccaaggctttcgacggcgtcgatgccatggtgtgctatgccatgaag
gcgaattcgaaccaggcggtgctgaagacgctcgcccggctcggcgccggcatcgacgtg
gtctcggagggcgagctgcgccgggcgctggccgccggcgttcccgcttcgcgcatcatg
ttctccggcgtcggcaagacgccgcgcgagatggatctggcgcttgaggccggcatctat
tgcttcaacgtcgaatccgagccggaactggaggtgctgaacgcccgcgccgtgaaggcc
ggcaaggtggcgcacgtctccttccgcatcaatcccgacgtcgatgcccgcacgcatgcc
aagatctcgacgggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcc
gtctatgcccgtgccgccagcctgccgggcatcaaggtgaccggcatcgacatgcatatc
ggcagccagatcaccgagctgcagcccttcgaggacgccttcaagctcttgcgcgaactc
gtcgacacgctgcgcgccgacggtcacaccatcgatcacgtcgatgtcggcggcgggctc
ggcattccctacaaaacggacaatgcgccgccgccgttgccggatgcctatgccgagatc
gtcaagaaccagctcaaggggctggactgcaagatcgtgaccgagcccggccggctgatc
gtcggcaatgccggcatcctcgtcaccgaggtcatctatgtgaaggatggcggtgaaaaa
accttcgtcatcgtcgatgcggcgatgaacgatctcatccgcccgacgctctacgaggcc
tggcacgagatccagccggtcgtcatctccgccgccagtgcgccgcgcatccgggcggac
gtggtaggcccggtctgcgagaccggcgactatctggcgcaggaccgcgaaatggcgcag
ccgaagcccggcgacctcatcgccgtcggctccgccggcgcctatggcgccgtgcaggcc
ggcacctacaacagccgcctgcttgtgccggaagtgctggtcaacgggtcccggttccac
gtcgtgcggccgcggcttacctatgatgacctgatcggtctcgattcggtgccggactgg
ctcgtctga
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