Shinella sp. HZN7: shn_18635
Help
Entry
shn_18635 CDS
T04278
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00020
Citrate cycle (TCA cycle)
shz00640
Propanoate metabolism
shz00660
C5-Branched dibasic acid metabolism
shz00720
Other carbon fixation pathways
shz01100
Metabolic pathways
shz01110
Biosynthesis of secondary metabolites
shz01120
Microbial metabolism in diverse environments
shz01200
Carbon metabolism
Module
shz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
shn_18635
00640 Propanoate metabolism
shn_18635
00660 C5-Branched dibasic acid metabolism
shn_18635
09102 Energy metabolism
00720 Other carbon fixation pathways
shn_18635
Enzymes [BR:
shz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
shn_18635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ANH05850
LinkDB
All DBs
Position
complement(3859086..3860279)
Genome browser
AA seq
397 aa
AA seq
DB search
MNIHEYQAKALLKSYGAPVAEGVAIFSADEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFK
ELGPDAKGGVRLAFSIDEAKAHAREMLGNTLVTAQTGEAGKQVNRLYIEDGADIDRELYL
SLLVDRSVGQVAFVVSTEGGMDIEAVAHDTPEKILTVAINPEAGVTADDLAKLTAALKLE
GEAKADAEKLFPILYKAFVEKDMSLLEINPLIVMKNGRVRVLDAKVSFDGNALFRHDDIK
ALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVG
GGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVVAAVQEVGLKVPLVVRLE
GTNVELGKKILNESGLAITAADDLDDAAKKIVAAING
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcatgaatatcaggccaaggctctcttgaagagctatggcgctccggtcgcc
gagggcgtcgcgatcttctccgccgacgaggcggaagcggccgccaagtcgcttcccggc
ccgctctacgtggtcaagagccagatccatgccggcggccgcggcaagggcaagttcaag
gagctcggccccgacgccaagggcggcgtccgcctcgccttctcgatcgacgaagccaag
gcgcatgccagggaaatgctcggcaacacgctcgtcaccgcgcagaccggcgaagccggc
aagcaggtgaaccgcctctatatcgaggacggcgccgacatcgaccgcgaactctatctc
tcgctgctcgtcgaccgctcggtcggccaggttgcgttcgtcgtttcgacggaaggcggc
atggacatcgaggccgtcgcccatgacacgccggaaaagatcctcaccgtcgcgatcaat
ccggaagccggcgtcaccgccgacgaccttgccaagctgaccgcggccctgaagctcgaa
ggcgaagccaaggccgacgcggaaaagctcttcccgatcctctacaaggcctttgtcgag
aaggacatgagcctcctggagatcaacccgctgatcgtcatgaagaacggccgcgtgcgc
gttctcgacgccaaggtctcgttcgacggcaacgcgctgttccgccatgacgacatcaag
gcgctgcgcgacgagaccgaagaggacgccaaggagatcgaggcctccaagtgggacctc
gcctatgtcgcgctcgacggcaatatcggctgcatggtcaatggtgctggccttgccatg
gccacgatggacatcatcaagctctacggcaaggagccggcgaacttctgtgacgtcggc
ggcggcgccggcaaggagaaggtcgcggcggccttcaagatcatcacggccgacccgaag
gtcgagggcattctcgtcaacatcttcggcggcatcatgaagtgcgatgtcatcgccgag
ggtgtcgtcgcggccgtgcaggaagtcggcctcaaggttccgctggtcgttcgcctcgaa
ggcacgaatgtcgagcttggcaagaagatcctgaacgaatccggcctggcgatcaccgcc
gccgacgatctggacgacgccgccaagaagatcgttgccgcgatcaacggctaa
DBGET
integrated database retrieval system
