Shinella sp. HZN7: shn_19075
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Entry
shn_19075 CDS
T04278
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00630
Glyoxylate and dicarboxylate metabolism
shz00680
Methane metabolism
shz01100
Metabolic pathways
shz01120
Microbial metabolism in diverse environments
shz01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
shn_19075
09102 Energy metabolism
00680 Methane metabolism
shn_19075
Enzymes [BR:
shz01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
shn_19075
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Ortholog
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_21
Fer4_10
Fer4_6
Fer4_2
Fer4_9
Fer4_15
Fer4_4
LdpA_Fe-S-bd
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
ANH05932
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Position
3947457..3950336
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AA seq
959 aa
AA seq
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MPLVPEIDFGTPASRSERMVTLTIDGNEITVPEGTSIMRASMEAGIKVPKLCATDMVDAF
GSCRLCLVEIEGRNGTPASCTTPVAPGLVVHTQTSRLKDIRKGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYEGDNHVKARNNGEINARWMPKDESNPYFTYDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFDSRVSPGMHEHFLESECVSCGACVQACPTATLTEKS
VIEIGQPEHSVVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
THKERILNPMIREKISDPWREVTWEEANAHVAAEFRRIQYQYGRDSIGGITSSRCTNEET
FLVQKLIRAGFGNNNVDTCARVCHSPTGYGLGQAFGTSAGTQNFDSVEHTDVVIVIGANP
TDGHPVFASRLKKRLRQGAKLIVIDPRRIELVSSPHIKSSYHLPLKPGTNVAVVTALAHV
IVTEGLYDEKFIRERCDWSEFEDWAAFVAEPRHSPEETEAFTGVPAETLRGAARLFATGG
NGSIYYGLGVTEHSQGSTTVMAIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATREIFEKLWGVTLNNEPGLRIPNMLDAAVEGTFKGLYIQGEDILQSDP
DTRHVSAGLAAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRRVMT
PKNGYADWEVTQNLARAMGLAWNYSHPSEIMDEIAATTPSFALVSYDYLEKNGSVQWPCN
EKNPKGSPIMHINGFVRGKGKFIRTEYVATDEKTGPRFPLLLTTGRILSQYNVGAQTRRT
ENVVWHEEDRLEIHPHDAENRGIRDGDWVRLASRAGETTLRALVTDRVAPGVVYTTFHHP
TTQANVITTDFSDWATNCPEYKVTAVQISPSNGPSDWQIEYDELARRSRRIRGKLEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgttccagaaatcgacttcggcactcccgcctcccgctcggaaaggatggtg
acgctcaccatcgacgggaacgagatcaccgttcccgagggcacctccatcatgcgcgcc
tcgatggaagccggcataaaggtgccgaaactctgcgccaccgacatggtggatgccttc
ggctcctgccggctctgcctcgtcgagatcgagggccgcaacggcacgcccgcctcctgc
acgaccccggtggcgcccggcctcgtcgtccacacccagacgagccggctcaaagacatc
cgcaagggcgtgatggagctctacatctccgaccacccgctcgactgtctcacctgcgcg
gcgaacggcgactgcgagctgcaggacatggccggggcggtcggcctgcgcgacgtgcgc
tacggctacgagggcgacaaccacgtcaaggcccgcaacaacggcgagatcaacgcccgc
tggatgccgaaggacgaatcgaacccctatttcacctacgatccgtcgaaatgcatcgtc
tgctcgcgctgcgtgcgggcctgcgaggaggtgcagggcaccttcgcgctgaccatcgag
ggccgcggcttcgacagccgcgtctcgcccggcatgcatgagcatttcctcgaatccgaa
tgcgtctcctgcggcgcctgcgtgcaggcctgcccgacggcgacgctgaccgagaaatcc
gtcatcgagatcggacagccggagcattccgtcgtcacgacctgcgcctattgcggcgtc
ggctgctccttcaaggcggaaatgcgcggcgaggagctggtgcgcatggtgccctggaag
gatggccaggcgaaccgcggccattcctgcgtcaagggccgcttcgcctatggctactcg
acccacaaggagcgcatcctcaacccgatgatccgcgagaagatctcggacccgtggcgc
gaggtgacctgggaggaagccaatgcccatgtcgccgccgagttccgccgcatccagtac
cagtacggccgggattcgatcggcggcatcacctcctcgcgctgcaccaacgaggagacc
ttcctcgtccagaagctgatccgcgccggcttcggcaacaacaatgtcgacacctgcgcc
cgcgtctgtcattcgccgacgggctacggcctcggccaggccttcggcacctccgccggc
acgcagaatttcgacagcgtcgagcacacggatgtcgtcatcgtcatcggcgccaacccg
acggacggccacccggtcttcgcctcgcgcctgaagaagcgcctgcgccagggcgccaag
ctgatcgtcatcgatccgcgccgcatcgagctcgtctcctcgccgcacatcaagtcgtcc
tatcacctgccgctgaagcccggcacgaacgtcgccgtcgtcacggcgctcgcccatgtc
atcgtgacggaaggcctctacgacgaaaaattcatccgcgagcgctgcgactggtcggag
ttcgaggactgggccgccttcgtcgccgagccgcgccacagccccgaggaaaccgaagcc
ttcaccggcgtgccggcggagacgctgcgcggcgccgcccgcctgttcgccaccggcggc
aacggctcgatctattacggcctcggcgttaccgagcacagccagggctcgaccaccgtc
atggcgatcgccaaccttgccatggcgaccggcaatatcggccgcgagggcgtcggcgtg
aacccgctgcgcggccagaacaacgtgcagggctcgtgcgacatgggctccttcccgcat
gaactgccgggctaccgccatatctccgacgacgcgacgcgcgagatcttcgagaagctt
tggggcgtgacgctcaacaacgagccgggcctgcgcatccccaacatgctggacgccgcc
gtcgagggcacgttcaagggcctttacatccagggcgaggacatcctccagtccgacccg
gacaccaggcacgtctccgcaggcctggccgccatggaatgtgttgtcgtgcaggacctc
ttcctcaacgagacggcgaactacgcccatgtcttcctgccgggctcgaccttcctcgaa
aaggacggcaccttcaccaatgccgagcgccgcatcaaccgcgtgcgccgcgtgatgacg
ccgaagaacggctatgcggactgggaggtcacccagaacctcgccagggccatgggcctt
gcctggaactacagccatccctccgagatcatggacgagatcgccgcgacgacgccgagc
ttcgccctcgtctcctacgactatctggagaagaacggctcggtgcagtggccctgcaac
gagaagaatcccaagggctcgccgatcatgcacatcaacggcttcgtgcgcggcaagggc
aagttcatccgcacggaatatgtcgcgacggacgagaagaccggcccgcgcttcccgctg
ctgctcacgaccggccgcatcctcagccagtacaatgtcggcgcccagacgcggcgcacg
gaaaacgtcgtctggcacgaggaggaccggctggagatccacccgcacgatgcggaaaac
cgcggcattcgcgacggcgactgggtgcgcctcgccagccgcgccggcgagacgacgctg
cgcgccctcgtcaccgatcgcgtcgcgccgggcgtcgtctacacgaccttccaccacccg
acgacgcaggcaaatgtcatcaccaccgatttctccgactgggcgacgaactgtccggag
tataaggtgaccgccgtgcagatctcgccgtcgaacggcccatccgactggcagatcgaa
tatgacgaactggcccgtcgctcgcgccggatcaggggcaagctggaggcagcggagtag
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