Shinella sp. HZN7: shn_19300
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Entry
shn_19300 CDS
T04278
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shz03021
]
shn_19300
Transcription machinery [BR:
shz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
shn_19300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_3
HTH_23
KORA
HTH_28
HTH_31
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ANH05971
UniProt:
A0A1A9G6G0
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Position
4005901..4006761
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AA seq
286 aa
AA seq
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MATTTADRRMIKLAMSAPYLERDEEQALAQAWKNNKDQEARNRIAMAHMRLVVSMAGKFR
NFGLPLGDLVQEGYIGLLEAAARFEPERQVRFSTYASWWIRASIQDYVLRNWSIVRGGTS
SAQKALFFNLRRLRARLARGDTYLTAEAMHQEIAAALGVSTADVRTMDARLSSSDVSLQA
PISSAEGEGSNRLDFLTSDAPLPDEQAEGSIDGERRHHWLHAALGQLNEREMKIIRARRL
AENGATLEELGAVLGISKERVRQIENRALEKLRAVLVSKTTDFAYA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctacgacgaccgcagaccgccgcatgatcaagctcgcaatgtccgcgccctatctc
gaacgggacgaggaacaggcgctggcccaggcctggaagaacaacaaggatcaggaagcc
cgcaaccgcatcgccatggcccatatgcgcctggtggtctcgatggccgggaagttcagg
aacttcggcctgcccctcggcgatctcgtacaggaaggctatatcgggctcttggaagcc
gctgcccgcttcgagccggaacggcaggtgcgcttttccacctatgccagctggtggatc
cgcgcctcgatccaggactatgtgctgcgcaactggtcgatcgtgcgcggcggcaccagt
tcggcgcagaaggcgctcttcttcaacctgcggcgcctgcgcgcgcgcctcgcccgcggc
gacacatacctcaccgccgaggcgatgcaccaggagatcgcggccgcgctcggtgtcagc
accgccgacgtgcgcaccatggatgcccgcctttcctcctccgacgtctcgctccaggcg
ccgatctcctccgccgagggggagggctcgaaccggctcgactttctcaccagcgatgcc
ccccttcccgacgagcaggcggaaggcagcatcgacggtgaacgccgccatcactggctg
catgccgcgctcggccagctcaacgagcgcgagatgaagattatccgcgcccggcggctg
gcggagaacggcgcgacgctcgaggaactcggcgccgtgctcggcatttccaaggagcgc
gtgcgccagatcgagaaccgggcgctggaaaaactgcgcgccgtgctggtcagcaagacc
acggatttcgcctacgcctga
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