Shinella sp. HZN7: shn_19855
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Entry
shn_19855 CDS
T04278
Name
(GenBank) MFS transporter
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shz03009
]
shn_19855
Enzymes [BR:
shz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
shn_19855
Ribosome biogenesis [BR:
shz03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
shn_19855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
FtsJ
Methyltransf_25
Methyltransf_31
Methyltransf_11
DUF2742
MTS
Methyltransf_23
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
ANH06070
LinkDB
All DBs
Position
complement(4132843..4134252)
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AA seq
469 aa
AA seq
DB search
MNDDKHKNRTHPKRHRPGGKAPSPGPAANHPEKPGLRARQAAAKILAAVIDRKTPLDGML
DLENGNPAYCQLNDADRALVRAILNTALRHLPRIEAILDTLVGTPLPDGARALHHVLTVA
AAQILYLDVPDHSAVDLAVEQAQIDPRNRRFASLTNAVLRRLSREKASHLTATKAVSVIP
TWFHERLSAVYGRDHAARIADALLEPSTVDLTVKSDPEGWAARLGGLVLPTGSVRLPVAS
GAIPALEGFEAGEWWVQDAAASLPAKLFSDLAGKRVADLCAAPGGKTAQLAAAGARVTAL
DQSGNRLKRLIGNLDRLHLSAETVEANMAEYRPGELFDAVLLDAPCSSTGTIRRHPDVLW
TKGPEDIGKLAGLQERLLRHALTLVRPGGELVFSNCSLDPSEGEDMVARVLADNPDWRIA
PIDPADWPGLEAAISPRGEFRTTPAMLPATVGHAGGLDGFYAVRLVHAG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgacgacaaacacaaaaacagaacgcatccgaaacgccatcgccccggcggcaag
gcgccgtctccggggcctgctgcgaaccatccggaaaagccgggcctgcgggcccggcag
gccgcggccaagatcctggcggcggtcatcgatcgcaagacgccgctcgacggcatgctc
gacctcgaaaacggcaatccggcctattgccagttgaacgatgccgaccgcgcgcttgtc
cgggccatcctcaacacggcgttgcgccacctcccccgtatcgaggccatcctggatacg
ctcgtcggcacgcccctgccggacggcgcccgcgcgctgcatcatgtgctgacggtcgcg
gcggcgcagatcctttatctcgacgtgcctgatcattccgccgtcgaccttgcggtcgag
caggcgcagatcgacccgcgcaaccgccgcttcgccagcctcaccaatgcggtgctgcgc
cgcctttcgcgcgaaaaggcctcgcatctgacggcgacaaaagcggtttccgttattccg
acctggttccatgagcggctttccgccgtctatggccgtgaccatgccgcgcgtattgcc
gatgcgctgctcgaaccctccactgtcgacctcactgtgaaatcggacccggaaggctgg
gccgcgcggctcggcggcctggtgctgccgaccggttcggtgcgcctgcccgttgcctcc
ggcgccattccggcgctcgaaggcttcgaggccggggaatggtgggtgcaggatgccgcg
gcgagcctgccggcaaaactgttttccgaccttgccggcaagcgggtcgccgatctctgc
gccgcacccggcggcaagaccgcgcagcttgccgctgccggcgccagggtcaccgccctc
gaccagtccggcaatcgcctgaagcggctcatcggcaatctcgaccggctgcatctttcg
gccgagacggtcgaggcgaacatggcggaataccgtccgggcgagctgttcgatgccgtg
ctgctcgatgcgccctgctcctcgacgggcacgatccgtcgccatcccgatgtattgtgg
accaagggaccggaggatatcggcaagctggccggcctgcaggagcgcctgctgcgccac
gcactgacgctcgtgcgccccggcggggagctggtcttctccaactgctcgctcgatccg
agcgagggcgaggacatggttgcccgggttctcgccgacaatccggactggcgcatcgcg
ccgatcgatcccgccgattggccgggtctggaggcggcgatctctccgcgcggcgaattc
cgcaccacgcctgccatgctgcccgcgacggtcggccatgccggcggcctggacgggttt
tatgccgtacggctcgtccatgccggctga
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