Shinella sp. HZN7: shn_19965
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Entry
shn_19965 CDS
T04278
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shz
Shinella sp. HZN7
Pathway
shz03030
DNA replication
shz03430
Mismatch repair
shz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
shn_19965
03430 Mismatch repair
shn_19965
03440 Homologous recombination
shn_19965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shz03032
]
shn_19965
03400 DNA repair and recombination proteins [BR:
shz03400
]
shn_19965
Enzymes [BR:
shz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
shn_19965
DNA replication proteins [BR:
shz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
shn_19965
DNA repair and recombination proteins [BR:
shz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
shn_19965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANH06087
UniProt:
A0A1A9G4J8
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All DBs
Position
4158011..4158715
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AA seq
234 aa
AA seq
DB search
MREIIFDTETTGLDSKLDRVIEIGGVELENHFPTGRTLHLFISPGDRKVHPDALAVHGIT
DEFLKDKPSFADLAQQILDFFGDARWVAHNANFDMGFINAEFERIGLPPILQEKVTDTLA
LARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQAALGLGMAE
SGRRTLVEAEDDVVLPLGVRPKPLAPRLSEEERAAHAAMVQKMGDKAIWTKYGD
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcatcttcgatacggaaacgaccggcctcgacagcaagctcgaccgcgtc
atcgaaatcggcggcgtggagctggagaatcatttcccgaccggccgcacgctgcacctt
ttcatcagcccgggcgaccgcaaggtgcacccggatgcgcttgccgtgcacggcatcacg
gacgagttcctgaaggacaagccgtccttcgccgatctggcgcagcagatcctcgatttc
ttcggcgatgcccgctgggtggcacacaatgccaacttcgacatgggcttcatcaatgcc
gagttcgagcgcatcggcctgccgccgatcctgcaggaaaaggtgacggacacgctggcg
ctggcgcgccgcaagcatccgatggggccgaactcgctcgatgcgctctgccggcgctac
ggcatcgacaattcgcaccgcacgaaacacggcgccctgctcgactccgaactgctcgcg
gaagtctatatcgagatgatcggcggccggcaggcggcgctcgggctcggcatggccgag
agcggccggcggacgctggtcgaggcggaggacgacgtcgtcctgccgctcggcgtcagg
ccgaagccgcttgcgccccgtctctccgaggaggagcgcgccgcccatgccgccatggtg
cagaagatgggcgacaaggcgatctggacaaaatacggcgattga
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