KEGG   Shinella sp. HZN7: shn_20735
Entry
shn_20735         CDS       T04278                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
shz  Shinella sp. HZN7
Pathway
shz03030  DNA replication
shz03410  Base excision repair
shz03420  Nucleotide excision repair
shz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    shn_20735
   03410 Base excision repair
    shn_20735
   03420 Nucleotide excision repair
    shn_20735
   03440 Homologous recombination
    shn_20735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shz03032]
    shn_20735
   03400 DNA repair and recombination proteins [BR:shz03400]
    shn_20735
Enzymes [BR:shz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     shn_20735
DNA replication proteins [BR:shz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     shn_20735
DNA repair and recombination proteins [BR:shz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     shn_20735
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     shn_20735
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 HHH HHH_2 IMS_HHH
Other DBs
NCBI-ProteinID: ANH06224
UniProt: A0A1A9G5P4
LinkDB
Position
complement(4329490..4332477)
AA seq 995 aa
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNDLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGFEA
DDLIATYARLAEADGADVTIVSSDKDLMQLVTENVSMYDGMKDKQISIPEVVEKWGVPPA
KMIDLQSLTGDSTDNIPGVPGIGPKTAAQLLEEYGDLDTLLARAEEIKQVKRRENIIANR
ALVLLSRQLVTLKTDTPLDTPLDDLILHPQDGPRLIAFLKAMEFTTLTRRVAEACECDAG
AIAPADVPVEWGAEAHGPDLDKGDVAGPALVLDGKETAAEAAATLLPTAGADGDTPSALA
RARAERFSAAPIDHASYETVRDIETLDRWISAARETGLVGFDTETTSLDAMQAELCGFSL
AIADNAKDPTGTVIRACYVPLNHKTGVGDLLGGGLAEGQIPIRPALERLKSLLEDPSVLK
VAQNLKYDYLVMRRHGITVKGFDDTMLMSYALDAGAGTHGMDTLSERWLGHKPISYKDVA
GSGKGAQTFDMVDISRATAYAAEDADVTLRLWHVLKPRLASERMTTVYERLERPLVPVLA
RMEERGITIDRQVLSRLSGELAQGAAGLEEEIYDLAGERFNIGSPKQLGDILFGKMGLPG
ASKTKTGQWSTSAQVLEDLAAQGIPLPRKIVDWRQLTKLKSTYTDALPGFVHPDTKRVHT
SYALAATTTGRLSSSDPNLQNIPVRTAEGRKIRTAFISTPGHKLVSADYSQIELRVLAHV
ADIPQLKQAFADGIDIHAMTASEMFGVPVDGMPPEVRRRAKAINFGIIYGISAFGLANQL
SIERSEAGDYIKKYFERFPGIKDYMDQTKAFAREKGYVETIFGRRAHYPEIKSSNPSVRA
FNERAAINAPIQGSAADIIRRAMVKMEPALAAAGLSARMLLQVHDELIFEVEDGEVEKAV
PVIIGVMENASLPALSMKVPLKVDARAAHNWDEAH
NT seq 2988 nt   +upstreamnt  +downstreamnt
atgaaaaaaggtgatcatctcttcctcgtcgacggctcgggcttcatcttccgcgccttc
cacgccatcccgccgctcaaccgcaaatcggacgggctgccggtcaatgccgtctcgggt
ttctgcaacatgctgtggaagctcctgaaggatgcgcgcaacaccgatgtgggcgtgacg
ccgacccatttcgccgtcatcttcgactattcctcgaagaccttccgcaacgacctctac
gaccagtacaaggcgaaccgcacggcaccgcccgaggacctgatcccgcagttcggcctg
atccgccacgcgacgcgcgccttcaacctgccctgcatcgagaaggaaggcttcgaggcc
gacgacctgatcgccacctatgcccgccttgcggaggcggacggcgcggatgtcaccatc
gtctcctccgacaaggacctcatgcagctcgtgaccgagaacgtctcgatgtatgacggc
atgaaggacaagcagatctccattccggaagtcgtcgagaaatggggcgtgccgccggca
aagatgatcgacctccagtcgctgaccggcgattcgactgacaatatcccgggcgttccc
ggcatcggcccgaagaccgccgcgcagctcctcgaagaatatggcgatctcgacacgctg
cttgcccgcgccgaggagatcaagcaggtcaagcgccgcgagaacatcatcgccaaccgc
gcgctcgtgctgctctcccgccagctcgtcacgctgaagacggatacgccgctcgacacg
ccgctcgacgacctgatcctgcatccgcaggacgggccgcggctgatcgccttcctgaag
gcgatggaattcaccacgctgacgcgccgcgtcgccgaagcctgcgagtgcgacgcgggc
gccatcgcgccggcggacgtgccggtcgaatggggcgccgaggcgcatggcccggacctc
gacaagggcgacgtcgccggccccgccctcgtgctcgacggcaaggaaacggcggccgag
gccgctgccacgctgctgcccaccgccggcgcggatggcgacacgccctcggcgctcgcc
agggcccgcgccgaacgcttttcggccgcccccatcgaccatgccagctacgaaaccgtg
cgggacatcgaaacgctggaccgctggatctccgccgcgcgcgagaccggcctcgtcggc
ttcgacaccgagacgacctcgctcgacgccatgcaggcggagctttgcggcttctccctt
gcgatcgccgacaatgccaaggacccgacgggcaccgtcatccgcgcctgctacgtgccg
ctcaaccacaagaccggcgtcggcgatttgctcggcggcgggctcgccgaggggcagatc
ccgatccggccggcgctggaacggctgaaaagcctgctggaggatccttccgtcctgaag
gtcgcgcagaacctcaaatacgattacctcgtcatgcgccgccacggcatcaccgtgaag
ggtttcgacgatacgatgctgatgtcctatgcgctcgacgcgggcgcgggcacgcacggc
atggacacgctctccgaacgctggctcggccacaagccgatttcctacaaggatgtcgcc
ggctcgggcaagggcgcgcagaccttcgacatggtggatatttcccgcgccacggcctat
gcggcggaagacgccgacgtgacgctgcgcctctggcacgtcttgaagccgcgccttgca
agcgagcgcatgaccaccgtctacgagcggctggagcgcccgctggtgccggtgctcgcc
cgcatggaagagcgcggcatcaccattgaccgccaggtgctgtcccgcctttccggggaa
ctcgcacagggcgccgccggccttgaggaggagatctacgaccttgccggcgaacgcttc
aacatcggctcgccgaaacagctcggcgacatcctgttcggcaagatgggcctgcccggc
gcctccaagacgaagaccggccagtggtcgacctccgcgcaggtgctggaggatcttgcc
gcccagggcattccgctgccgcgcaagatcgtcgactggcgccagctcaccaagctgaaa
tccacctatacggacgccctgcccggcttcgtgcatcccgacacgaaacgcgtgcacacg
tcctacgcgctcgccgccacgacgaccggccgcctctcctcctcggatccgaacctgcag
aacatcccggtgcgcacggcggaaggccgcaagatccgcacggccttcatctcgacgccc
ggccacaagctggtctcggccgactacagccagatcgagctgcgcgtgctcgcccatgtc
gccgacatcccgcagctgaaacaggcctttgccgacggcatcgacatccacgccatgacg
gcgtccgaaatgttcggcgtcccggtggacggcatgcccccggaggtccgccgccgcgcc
aaggcgatcaatttcggcatcatctacggcatctcggccttcggccttgccaaccagctc
tccatcgagcgctcggaggccggcgactacatcaagaaatatttcgagcgcttcccgggc
atcaaggactacatggaccagaccaaggccttcgcccgcgagaagggctatgtcgaaacc
atcttcggccgccgcgcacactacccggagatcaagtcgtccaatccctcggtgcgcgcc
ttcaacgaacgcgccgcgatcaacgccccgatccagggctcggctgccgacatcatccgc
cgcgccatggtcaagatggagccggcgctcgccgccgccggcctttccgcccgcatgctg
ctgcaggtgcatgacgaactgatcttcgaggtcgaggacggcgaggtggaaaaggcggtc
cccgtcatcatcggcgtgatggaaaacgcctccctgccggcgctttcgatgaaggtgccg
ttgaaggtggatgcgcgcgccgcgcacaattgggacgaggcgcactga

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