Shinella sp. HZN7: shn_20735
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Entry
shn_20735 CDS
T04278
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shz
Shinella sp. HZN7
Pathway
shz03030
DNA replication
shz03410
Base excision repair
shz03420
Nucleotide excision repair
shz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
shn_20735
03410 Base excision repair
shn_20735
03420 Nucleotide excision repair
shn_20735
03440 Homologous recombination
shn_20735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shz03032
]
shn_20735
03400 DNA repair and recombination proteins [BR:
shz03400
]
shn_20735
Enzymes [BR:
shz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
shn_20735
DNA replication proteins [BR:
shz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
shn_20735
DNA repair and recombination proteins [BR:
shz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
shn_20735
NER (nucleotide excision repair)
GGR (global genome repair) factors
shn_20735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH
HHH_2
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
ANH06224
UniProt:
A0A1A9G5P4
LinkDB
All DBs
Position
complement(4329490..4332477)
Genome browser
AA seq
995 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNDLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGFEA
DDLIATYARLAEADGADVTIVSSDKDLMQLVTENVSMYDGMKDKQISIPEVVEKWGVPPA
KMIDLQSLTGDSTDNIPGVPGIGPKTAAQLLEEYGDLDTLLARAEEIKQVKRRENIIANR
ALVLLSRQLVTLKTDTPLDTPLDDLILHPQDGPRLIAFLKAMEFTTLTRRVAEACECDAG
AIAPADVPVEWGAEAHGPDLDKGDVAGPALVLDGKETAAEAAATLLPTAGADGDTPSALA
RARAERFSAAPIDHASYETVRDIETLDRWISAARETGLVGFDTETTSLDAMQAELCGFSL
AIADNAKDPTGTVIRACYVPLNHKTGVGDLLGGGLAEGQIPIRPALERLKSLLEDPSVLK
VAQNLKYDYLVMRRHGITVKGFDDTMLMSYALDAGAGTHGMDTLSERWLGHKPISYKDVA
GSGKGAQTFDMVDISRATAYAAEDADVTLRLWHVLKPRLASERMTTVYERLERPLVPVLA
RMEERGITIDRQVLSRLSGELAQGAAGLEEEIYDLAGERFNIGSPKQLGDILFGKMGLPG
ASKTKTGQWSTSAQVLEDLAAQGIPLPRKIVDWRQLTKLKSTYTDALPGFVHPDTKRVHT
SYALAATTTGRLSSSDPNLQNIPVRTAEGRKIRTAFISTPGHKLVSADYSQIELRVLAHV
ADIPQLKQAFADGIDIHAMTASEMFGVPVDGMPPEVRRRAKAINFGIIYGISAFGLANQL
SIERSEAGDYIKKYFERFPGIKDYMDQTKAFAREKGYVETIFGRRAHYPEIKSSNPSVRA
FNERAAINAPIQGSAADIIRRAMVKMEPALAAAGLSARMLLQVHDELIFEVEDGEVEKAV
PVIIGVMENASLPALSMKVPLKVDARAAHNWDEAH
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggtgatcatctcttcctcgtcgacggctcgggcttcatcttccgcgccttc
cacgccatcccgccgctcaaccgcaaatcggacgggctgccggtcaatgccgtctcgggt
ttctgcaacatgctgtggaagctcctgaaggatgcgcgcaacaccgatgtgggcgtgacg
ccgacccatttcgccgtcatcttcgactattcctcgaagaccttccgcaacgacctctac
gaccagtacaaggcgaaccgcacggcaccgcccgaggacctgatcccgcagttcggcctg
atccgccacgcgacgcgcgccttcaacctgccctgcatcgagaaggaaggcttcgaggcc
gacgacctgatcgccacctatgcccgccttgcggaggcggacggcgcggatgtcaccatc
gtctcctccgacaaggacctcatgcagctcgtgaccgagaacgtctcgatgtatgacggc
atgaaggacaagcagatctccattccggaagtcgtcgagaaatggggcgtgccgccggca
aagatgatcgacctccagtcgctgaccggcgattcgactgacaatatcccgggcgttccc
ggcatcggcccgaagaccgccgcgcagctcctcgaagaatatggcgatctcgacacgctg
cttgcccgcgccgaggagatcaagcaggtcaagcgccgcgagaacatcatcgccaaccgc
gcgctcgtgctgctctcccgccagctcgtcacgctgaagacggatacgccgctcgacacg
ccgctcgacgacctgatcctgcatccgcaggacgggccgcggctgatcgccttcctgaag
gcgatggaattcaccacgctgacgcgccgcgtcgccgaagcctgcgagtgcgacgcgggc
gccatcgcgccggcggacgtgccggtcgaatggggcgccgaggcgcatggcccggacctc
gacaagggcgacgtcgccggccccgccctcgtgctcgacggcaaggaaacggcggccgag
gccgctgccacgctgctgcccaccgccggcgcggatggcgacacgccctcggcgctcgcc
agggcccgcgccgaacgcttttcggccgcccccatcgaccatgccagctacgaaaccgtg
cgggacatcgaaacgctggaccgctggatctccgccgcgcgcgagaccggcctcgtcggc
ttcgacaccgagacgacctcgctcgacgccatgcaggcggagctttgcggcttctccctt
gcgatcgccgacaatgccaaggacccgacgggcaccgtcatccgcgcctgctacgtgccg
ctcaaccacaagaccggcgtcggcgatttgctcggcggcgggctcgccgaggggcagatc
ccgatccggccggcgctggaacggctgaaaagcctgctggaggatccttccgtcctgaag
gtcgcgcagaacctcaaatacgattacctcgtcatgcgccgccacggcatcaccgtgaag
ggtttcgacgatacgatgctgatgtcctatgcgctcgacgcgggcgcgggcacgcacggc
atggacacgctctccgaacgctggctcggccacaagccgatttcctacaaggatgtcgcc
ggctcgggcaagggcgcgcagaccttcgacatggtggatatttcccgcgccacggcctat
gcggcggaagacgccgacgtgacgctgcgcctctggcacgtcttgaagccgcgccttgca
agcgagcgcatgaccaccgtctacgagcggctggagcgcccgctggtgccggtgctcgcc
cgcatggaagagcgcggcatcaccattgaccgccaggtgctgtcccgcctttccggggaa
ctcgcacagggcgccgccggccttgaggaggagatctacgaccttgccggcgaacgcttc
aacatcggctcgccgaaacagctcggcgacatcctgttcggcaagatgggcctgcccggc
gcctccaagacgaagaccggccagtggtcgacctccgcgcaggtgctggaggatcttgcc
gcccagggcattccgctgccgcgcaagatcgtcgactggcgccagctcaccaagctgaaa
tccacctatacggacgccctgcccggcttcgtgcatcccgacacgaaacgcgtgcacacg
tcctacgcgctcgccgccacgacgaccggccgcctctcctcctcggatccgaacctgcag
aacatcccggtgcgcacggcggaaggccgcaagatccgcacggccttcatctcgacgccc
ggccacaagctggtctcggccgactacagccagatcgagctgcgcgtgctcgcccatgtc
gccgacatcccgcagctgaaacaggcctttgccgacggcatcgacatccacgccatgacg
gcgtccgaaatgttcggcgtcccggtggacggcatgcccccggaggtccgccgccgcgcc
aaggcgatcaatttcggcatcatctacggcatctcggccttcggccttgccaaccagctc
tccatcgagcgctcggaggccggcgactacatcaagaaatatttcgagcgcttcccgggc
atcaaggactacatggaccagaccaaggccttcgcccgcgagaagggctatgtcgaaacc
atcttcggccgccgcgcacactacccggagatcaagtcgtccaatccctcggtgcgcgcc
ttcaacgaacgcgccgcgatcaacgccccgatccagggctcggctgccgacatcatccgc
cgcgccatggtcaagatggagccggcgctcgccgccgccggcctttccgcccgcatgctg
ctgcaggtgcatgacgaactgatcttcgaggtcgaggacggcgaggtggaaaaggcggtc
cccgtcatcatcggcgtgatggaaaacgcctccctgccggcgctttcgatgaaggtgccg
ttgaaggtggatgcgcgcgccgcgcacaattgggacgaggcgcactga
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