Shinella sp. HZN7: shn_21185
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Entry
shn_21185 CDS
T04278
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_21185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_21185
Enzymes [BR:
shz01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
shn_21185
Transporters [BR:
shz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
shn_21185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
AAA_22
AAA_29
AAA_30
ABC_ATPase
VirD1
DUF7625
DUF3995
Fpg-like_C
AAA_21
MMR_HSR1
AAA_15
GIIM
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ANH06304
UniProt:
A0A1A9G5X4
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All DBs
Position
4427283..4429079
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AA seq
598 aa
AA seq
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MADKSRTERPHVSSDTVATVLKRIIAENGREHVRGYILAILCLAVVAGTTGFTAWIMESV
VNEAFANKRADLVALICGSIFIAFVLRGFATYYQAVILSKIGNNIVARYQRRLYSHLMAL
SVGYFNESRSAYLAAQISQNVTGIRDVLNMTVTSVARDFLTLVALIGVMISKDWLLTLIV
FVVAPPLLIGLRYVSRRLRSATRESVELNSHVLGAMQETIQGIAIVKAFTMEAQLKTKVE
GIIDRAESRSNRIARLTERTAPMTETFAGAAIAGVLAYAAYRSIYGGVLPGAFFSFVTAL
LMAYDPAKRLARLQVSLERAVVNARMIYEVLDLKPRQADRPDAKPLVVSDATITFRGVRF
GYSENEAILKGVSFIAEGGRTTALVGPSGAGKSTVINLIPRFYDPEEGEILIDGQDIAHV
TKQSLRNAIAYVSQQPYLFEGTIRDNIRYGRPDATDAEIEEAARHAYAHDFILAQPLGYD
TPVGENGVTLSGGQRQRLSIARALVRGAPILLLDEATSALDTESEQAVQKALDEAMSGRT
VVVIAHRLSTIVRADKIIVMQGGTVAEEGTHEALASRENGLYARLNSLQAPAAGSTGK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttggccgataagagtcgaaccgagcgcccacacgtcagctccgacaccgtcgccaccgtg
ctcaagcgcatcatcgccgaaaacggccgcgagcacgtccgtggctatattctggccatc
ctctgcctcgccgtcgtcgccggcacgacgggttttaccgcctggatcatggaatcggtg
gtcaacgaggccttcgccaacaagcgcgccgacctcgtcgccctcatctgcggctcgatc
ttcatcgccttcgtgctgcgcggcttcgccacctattaccaggccgtcatcctgtcgaag
atcggcaacaacatcgtcgcgcgctatcagcgccggctctattcgcacctgatggcgctc
agcgtcggctatttcaacgaatcgcgctcggcctatctcgccgcccagatcagccagaac
gtcaccggcatccgcgatgtcctgaacatgacggtgacgtcggtcgcgcgtgacttcctg
acgctcgtcgccctcatcggcgtgatgatctccaaggactggctgctgacgctgatcgtc
ttcgtcgtcgccccgccgctcctgatcggcctgcgctacgtctccaggcgcctgcgcagc
gccacgcgcgaatccgtcgagctcaacagccatgtgctcggcgccatgcaggagacgatc
cagggcatcgccatcgtcaaggccttcaccatggaggcgcagcttaagaccaaggtcgag
ggcatcatcgaccgggccgaaagccgctccaaccgcatcgcgcggctgaccgaacgcacc
gcgccgatgaccgagaccttcgccggtgcggcgattgccggcgtgctcgcctatgcggcc
tatcgctcgatctatggcggcgtgctgccgggcgccttcttctccttcgtcacggcgctg
ctgatggcctacgacccggcaaagcgcctcgcccgcctgcaggtctcgctggagcgcgcg
gtcgtcaatgcccgcatgatctacgaggtcctcgacctgaagccgcgccaggccgaccgg
ccggatgcaaagcctctcgtcgtttccgatgccacgatcaccttccggggcgtgcgcttc
ggctattcggaaaacgaggcgatcctcaagggcgtgagcttcatcgccgagggtggccgc
acgacggcgctcgtcgggccgtccggcgccggcaagtcgacggtcatcaacctcatcccg
cgcttctacgatccggaagagggcgagatcctcatcgacgggcaggacatcgcccatgtg
acgaaacagtcgctgcgcaacgccatcgcctatgtctcccagcagccctatctcttcgag
ggcacgatccgcgacaatatccgctacggccgccccgatgcgacggatgcggagatcgag
gaggcggcgcgccatgcctatgcgcatgatttcatcctcgcccagccgctcggctacgac
acgcccgtcggcgagaacggcgtgacgctttccggcggccagcgccagcggctgtcgatc
gcccgtgcgctggtgcggggtgcgccgatcctcctgctcgacgaggcgacctcggcgctc
gacacggaatccgagcaggcggtgcagaaggcgctcgacgaggcgatgagcgggcgcacc
gtggtcgtcatcgcgcatcggctctccaccatcgtgcgggccgacaagatcatcgtcatg
cagggcggaacggtcgccgaagagggcacgcacgaggcgcttgcgagccgggagaacggt
ctctacgctcgcctcaacagcctccaggcacccgccgctggcagcacgggcaaatag
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