Shinella sp. HZN7: shn_21455
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Entry
shn_21455 CDS
T04278
Name
(GenBank) transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_21455
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
GntR family
shn_21455
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GFIT
Motif
Pfam:
Aminotran_1_2
GntR
RND-MFP_C
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ANH06351
LinkDB
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Position
complement(4478489..4479919)
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AA seq
476 aa
AA seq
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MALDRKSTNSEQKIRTILPDWSSLVPVLPAAGRRTPALYRELRRLIEAGDIPPGSKLPPT
RDLAQRLKTSRGSVVAAFETLIAEGFAVARTGAGTFVADRVPTLKPTEPVEREKSAPTMP
LPGTLGVAMADARTLKQFRTLLARHLARPGPEHFHYGDPRGGEALRQAVAAYLRQARGVR
CAARSIVITTGTQQGIDLVIRSALAPGDRVMIEDPCYPSARAAFSGNGLALCGLAVDGEG
ADIALAAPGARAVYVTPSHQFPLGVTMSMRRRLALIDWARETGGWIIEDDYDSEFRFAGP
PLAAMQGMDDSGRVIYLGTFSKVLFPGLRLGYAVIPDPLLDAVVALRGRSDRSPPTLAEA
ALTDLIREGHFAAHLRRARRQAQAARDALVAGLSTTGALSVGVPDQGLHLVAGLPAALAD
TDAVEIAARAGLGVRALSAMAVTNPPRQGLVIGFSGFAPEILKAAASRFAAALSGF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcattggatcgaaaaagcaccaattccgagcaaaaaatccggaccattctgccggac
tggtcctcgctcgttcccgttctcccggcggcgggccggcgcacgccggcgctctaccgc
gaactgcggcggctgatcgaggcgggcgacattccacccggcagcaagctgccgccgacg
cgggacctcgcgcagcggctgaagacctcgcgcggcagcgtggtcgccgccttcgagacg
ctgatcgccgagggcttcgcggtcgcccgcaccggggccggcaccttcgttgccgaccgg
gtgccgacgctgaagccgacggaaccggtcgagcgggagaagagcgccccgacaatgccg
ctgcccggcacgctcggcgtcgccatggccgacgcacgcacgctgaaacagttccgcacg
ctgctggcgcgccatctcgcccggccgggcccggagcacttccactatggcgatccgcgc
ggcggcgaagcgctgcgccaggcggtcgccgcctatctccggcaggcgcgcggcgtgcgc
tgcgcggcgcgctcgatcgtcatcacgacgggcacgcagcagggcatcgacctcgtcatc
cgcagcgcgctggcgccgggcgaccgggtgatgatcgaggacccgtgctatccgagcgcc
cgggcggccttttccggcaacggcctggcgctctgcggccttgccgtcgacggcgagggg
gcggatatcgccctggcggcaccgggcgcccgcgccgtctatgtcacgccgtcgcaccag
ttcccgctcggcgtgaccatgagcatgcgccggcggctcgccctgatcgactgggcgcgg
gagaccggcggctggatcatcgaggacgactatgacagcgagttccgcttcgccgggccg
ccgctcgccgccatgcagggcatggatgacagcgggcgcgtgatctatctcggcaccttc
tccaaggtgctcttcccgggcctcaggctcggttatgccgtcattcccgatccgctgctc
gacgcggtcgtggcgctgcgcggccgcagcgaccgcagcccgccgacgctggccgaggcc
gccctcaccgacctcatccgcgagggccacttcgccgcgcatctgcgccgcgcccggcgg
caggcgcaggcggcacgcgacgcgctggtggccgggctctcgacgaccggcgcgctttcg
gtcggcgtgccggaccagggcctgcacctcgtcgccggcctgccggccgcgcttgccgat
acggatgcggtggagattgccgcgcgcgccgggctcggcgtgcgggcgctctcggccatg
gccgtcaccaatccgccgcggcagggcctggtcatcggcttttccggcttcgccccggaa
atcctcaaggccgccgcatcgcgattcgcggcggcgctgtccgggttctaa
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