Shinella sp. HZN7: shn_21665
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Entry
shn_21665 CDS
T04278
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00362
Benzoate degradation
shz00624
Polycyclic aromatic hydrocarbon degradation
shz01100
Metabolic pathways
shz01120
Microbial metabolism in diverse environments
shz01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
shn_21665
00624 Polycyclic aromatic hydrocarbon degradation
shn_21665
Enzymes [BR:
shz01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
shn_21665
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ANH06388
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Position
4520029..4520778
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AA seq
249 aa
AA seq
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MTDLSNRKPETGAFFSRDRLWHPPGLTPGYKTSVLRSPQKALLSLDGTVSEITGPVFGHS
ILGELDNDLIHNFAKPGESAIGERIIVHGRVLDERARPVAGALLEFWQANAGGRYRHKKE
SYLAPLDPNFGGCGRTITDADGHYAFRTVKPGPYPWPNGVNDWRPAHIHFSVFGHGFAQR
LITQMYFEGDPMIWKCPIVQTIPDRAAIEQLVAALDWGNTIPMDARAYKFDIVLRGRRST
LFENRMEGN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgacggacctttccaatcgcaagcccgaaacgggcgccttcttctcccgcgatcgcctc
tggcacccgccgggcctgacgccgggctacaagacctcggtgctgcgctcgccgcagaag
gccttgctctcgctcgacggcacggtctcggagatcaccggcccggtcttcggccattcc
atcctgggcgagctcgacaacgacctgatccacaatttcgcgaaacccggcgaaagcgcg
atcggcgagcgcatcatcgtgcacggccgggtgctcgacgagcgggcgcggccggtggcg
ggcgcgctgctcgaattctggcaggccaatgccggcgggcgctaccgccacaagaaggaa
agctacctcgccccgctcgatccgaatttcggcggctgcgggcgcactatcaccgatgcg
gacggccactatgccttccgaaccgtcaagcccgggccctatccctggccgaacggcgtc
aacgactggcgcccggcgcatatccatttctccgtcttcggccacggtttcgcccagcgg
ctgatcacgcagatgtatttcgagggcgacccgatgatctggaaatgtcccatcgtgcag
acgatcccggacagggcggccatcgagcaactggtcgccgcgctcgactggggcaacacg
atccccatggatgcacgcgcctacaagttcgacatcgtgctgcgcggccgacgctcgacg
cttttcgagaaccggatggagggcaactga
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