KEGG   Shinella sp. HZN7: shn_21805
Entry
shn_21805         CDS       T04278                                 
Name
(GenBank) DNA helicase UvrD
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
shz  Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:shz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shz03400]
    shn_21805
Enzymes [BR:shz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     shn_21805
DNA repair and recombination proteins [BR:shz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    shn_21805
SSDB
Motif
Pfam: UvrD-helicase AAA_19 Zn_ribbon_Top1 UvrD_C UvrD_C_2 AAA_30 ResIII Helicase_RecD
Other DBs
NCBI-ProteinID: ANH06902
UniProt: A0A1A9G749
LinkDB
Position
complement(4547439..4549781)
AA seq 780 aa
MPGTLRGYLPTSFAMLTDPGVRSRYNESFVVHEMQKFEKFFADLGGFSLSQEQREACIRL
EDNNLLVASAGSGKSATMVGKVAYVLEKELYHPSEILVLAFNKSAADELKERIARQLNVD
EEALECRVTTFHALGRGIIEETEGRPPQLANWVEHPAGEARVIDKIIRELMEVDEEFRRL
WIDLLSILPKADIPAEVFDSEADYNRYIADRNDKGGSTIGTLADVYVKSLQEQRIANWLW
VHSVEFEYEKQISFKEEDGSERFVQPDFHYPLTDTFHEHFAINADGSSPFVNYAEHTKGK
RAGYKREELDFFETTSAQARDGTLLPHLEAQLTKREIPLTEKSVDEILKAVEPVVITHYQ
KLIGVCIKHIRASQLTLEMLLERAKSLHDKPRAQHFARAVWLITETYSRKLDEAKRIDFD
SMIGDAVRLVETGRYQSPYSLVLVDEFQDISDPRANLIKALKHQKPFTKVFAVGDDWQSI
YRFAGSDITIFTQFEANFGACWQGRLEQTYRCNQLLADTAAGFVQRNPDQIRKTVRSTRA
AIPRSIRVIPVSVEWRKPSFPKACFQLLDRLNTFLDGISSQWRRETGQKLKVLVLWRYNL
LDPFHGQPPEFSAIEVAGMSFHRSKGLEADYTILLDVSEGDYGVPSRIEDDELLNLVIPR
PETFAYAEERRLFYVALTRASRGTFILCNRRKPSRYIRELCEIAGNEVRFETIEGKELDQ
CPSCLVGELVERKGRNDTTFYGCNQFPECRHTQQSPPAAPHRQQAGEAGFVETVNRARAF
NT seq 2343 nt   +upstreamnt  +downstreamnt
atccccggcaccctaagaggctatctgccaacctcttttgccatgctcaccgacccgggt
gtccgtagtcgctacaacgaaagtttcgttgttcacgagatgcagaagttcgagaagttc
ttcgccgaccttggcggattttcgctttcccaggagcagcgggaggcctgcatccgtctg
gaagacaacaacctgctcgtcgcatcggccggctcaggcaagtccgcaaccatggtcggg
aaagtcgcctatgtcctcgaaaaggaactctaccatccgagcgaaattcttgttctggcg
ttcaacaagagcgcagctgatgagctgaaggaacggatcgccaggcaactgaacgtagat
gaggaggcgttggaatgccgggtgacgacatttcacgcgctcggccgagggatcatcgaa
gagacggaaggccgtccaccgcaactggccaactgggtcgagcatcccgccggcgaagcc
cgtgtgattgacaagatcatacgcgagctgatggaggttgatgaagagtttcgccgcctg
tggatcgaccttctctccattttgcccaaggccgacattccggcggaggtctttgactcg
gaggcggactacaatcgctacatcgccgatcgcaacgacaagggcggtagcaccatcggc
acacttgcagacgtgtatgtgaaatcccttcaggagcaacggatcgcgaactggttgtgg
gtccactctgtcgagtttgagtatgaaaagcagatctcattcaaagaggaggatgggagc
gagcgctttgttcaacctgacttccattacccgctgaccgacacgttccatgagcatttc
gcgattaacgcggatggttcgtcgccttttgtgaactacgccgagcacaccaagggtaaa
cgcgccggatacaagcgcgaagagttggatttcttcgagacgacctcagcacaggcgcgc
gatgggacgctgttgccgcatctcgaggcacagctgaccaaacgcgaaattccgctgacc
gagaaaagtgtcgacgagattctcaaggcggtcgagccggtggtgatcacgcactaccag
aagctgatcggcgtgtgcatcaagcatatccgggctagccagcttacgctggagatgctg
ctcgagcgggccaagtccctgcatgacaaaccccgcgcgcagcatttcgcgcgtgctgtc
tggctgatcacagaaacctattcccgcaagctcgacgaggcgaagcgtatcgacttcgat
tcgatgatcggcgacgcagtgcgcttggtcgagacgggtcgctatcagagcccgtattca
ctggtcctggtggatgagtttcaggatatttcggacccgagggccaatctgatcaaggcg
ctcaaacaccagaagcccttcaccaaggtttttgctgtcggagacgattggcagtcgatc
taccgcttcgccgggtcggacattacgatcttcacccagttcgaggcgaactttggcgcc
tgctggcaaggtcggctcgaacagacctaccgctgcaaccagctgctcgccgacactgct
gcgggcttcgttcagcgcaatccagaccagatcaggaagacagtgcggtcgacgcgcgcc
gccataccgcgatcaatccgggtcattccggtcagcgtggagtggcgaaagccaagcttc
ccgaaagcctgcttccaactgctcgatcgcctgaacacctttcttgatggcatttcgagc
cagtggcggcgtgagaccgggcaaaagctgaaggtactggtcttgtggcgttacaacctg
ttggatccatttcacggtcagccccccgaattttcggcgatcgaggttgccggcatgtcg
tttcatcgctccaagggccttgaggcagattacacgatcctgcttgatgtcagcgagggc
gactatggcgttcccagccgcatcgaagatgacgagctgctcaatctcgttatcccgcgc
ccggagacgttcgcctacgcggaggagcgccgactcttctatgtcgcgcttacccgcgcc
agcagagggacgttcatcctctgcaataggcgcaagccctcacgctacattcgcgagctt
tgcgaaatcgccggcaatgaggtccggtttgaaaccatcgaggggaaggaactcgaccag
tgtcccagttgcctggtcggggaactggttgagcgcaaaggtcgcaacgacaccaccttt
tacggctgcaatcaatttcctgagtgccgtcacactcagcagtcacctccggcggcacct
catcgacaacaagcgggcgaggccggttttgtcgagacggtaaatcgggcaagagccttc
taa

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