Shinella sp. HZN7: shn_22710
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Entry
shn_22710 CDS
T04278
Name
(GenBank) spermidine/putrescine ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_22710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_22710
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
shn_22710
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
AAA_22
AAA_30
RsgA_GTPase
AAA_25
AAA
T2SSE
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ANH06964
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All DBs
Position
pShin-01:complement(60939..62045)
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AA seq
368 aa
AA seq
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MTASAGAAIEIRKASKRYGAFTALNDIDLHIRPGEFMTLLGPSGSGKTTTLNLIAGFTDI
SSGTLEIGGRSVTGLPSHKRNIGVVFQHYALFPHMTVGKNVAYPLMLRGIKGDDREKRVK
RALDMVKMADFAHRYPNELSGGQQQRVALARALVFDPPLLLMDEPLGALDKKLREWLQLE
IKRIHRELGTTFVYVTHDQEEALVLSDRIAVFNGGRIEQIGTGRELYDHPATLFVGRFIG
DSTVLRGKSEAAGDGTVMTIGGQRIFAQGRLPGEARPVILLRPERVGLKRPGADALTGEN
RLSGTVTEAIYLGSGSKYEVRLADGTIAVVRSPLGATDFAIGDTADIAFLPTDLTLLPDD
ASADVTLT
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatccgctggcgccgccatcgaaatccgcaaggcctccaagcgctatggcgcc
ttcaccgccctcaacgacatcgacctccatatccgccccggcgagttcatgacgctgctc
ggcccctccggctccggcaagacgacgacgctgaacctcatcgccggctttaccgacatc
agctccggcacgctcgagatcggcggcaggagcgtcaccggcctgccctcgcacaagcgc
aacatcggcgtcgtcttccagcactacgccctcttcccgcacatgacggtcggaaagaac
gtcgcctatcccctgatgctgcgcggcatcaagggcgacgaccgcgagaagcgggtgaaa
cgcgccctcgacatggtgaagatggcggatttcgcccatcgctacccgaacgaactctcc
ggcggccagcagcagcgcgtggcgctcgcccgcgccctcgtcttcgatccgccgctcctc
ctgatggacgagccgctcggcgcactcgacaagaagctgcgcgaatggctgcagctcgaa
atcaagcgcatccaccgcgagctcggcaccaccttcgtctacgtcacccacgaccaggag
gaagcgctcgtcctctccgaccgcatcgccgtcttcaacggcgggcgcatcgagcagatc
ggcacgggccgcgaactctacgatcatcccgcgaccctcttcgtcggccgcttcatcggc
gattccaccgtcctgcgcggcaagtccgaagccgccggcgacggcacggtgatgaccatc
ggcggccagaggatcttcgcccagggccgccttcccggcgaggcccgcccggtcatcctg
ctccggcccgagcgcgtggggctgaagcgccccggcgcggacgccttgacgggcgaaaac
cgcctttccggcacggtcaccgaggcgatctatctcggctccggctcgaaatacgaggtg
cggctggcagacggaacgatcgccgtggtgcgcagccccctcggcgcgaccgattttgcg
atcggcgataccgccgacatcgccttcctgcccaccgatctcacccttcttcccgatgat
gccagcgccgacgtgacgctgacctga
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