Shinella sp. HZN7: shn_22860
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Entry
shn_22860 CDS
T04278
Name
(GenBank) GntR family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_22860
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
GntR family
shn_22860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Fe_dep_repress
HTH_36
HTH_Crp_2
DUF6436
Motif
Other DBs
NCBI-ProteinID:
ANH06990
LinkDB
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Position
pShin-01:complement(98373..99851)
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AA seq
492 aa
AA seq
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MRTNVSETIFFIDRESGLGLQAQLRETVVSAVLAGRVQPGAHLPSTRKLSEYLNISRITV
TLAYQELVSQGYVEAANRSSYRIAGNPPGRGVEGDRPAAGATPVDWTGKMKMRFEVVRQI
PKPLDWRRYPYPFLYGQMDPSLFDLNAWRDCARRALAREDFILMASDFAAADDVRLVNYI
CSRTLPRRGIHANPDEVLITVGAQNALWIVTRLILEKGSSAVCENPCHPDISASLLLSGA
KVTTVDVDGEGLPPDGLPDDTDAVFVTPSHHSPTGATMPIDRRTRLLQAAAEKDFVIVED
DYEFEISYLAPPSPALKAFDSTGRVLYIGSFSKSLFPGLRLGYLVAPAPFIREARALRSL
MLRHPPGHLQRTAAYFLALGHYDVVLHRMRTEYHKRHVLMAEALQHEGLTVAGSSAFGGT
SFWMEGPQGLDADRLVTELRQDGVLVESGSPFFPRNDEPCRYFRMGYSSIPRTNIVEGVS
RVRAGIDRLMDA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccaatgtttccgagaccatcttcttcatcgaccgggagagcgggctgggtttg
caggcccagttgcgcgagaccgtggtctcggccgtgcttgcggggcgcgtgcagcccggc
gcgcacctgccctcgacacgcaagctctcggaataccttaatatttcccgcatcacggtg
acgctcgcctatcaggagctggtgtcccagggctatgtggaggcggccaaccgcagctcc
taccgcatcgccggcaatccgcccggccggggcgtggaaggcgaccggcccgccgccggc
gccaccccggtcgactggaccggcaagatgaagatgcgcttcgaggtcgtgcgccagatt
ccaaaaccgctcgactggcggcgctatccctatccgttcctctatggccagatggacccc
tcgctgttcgacctcaacgcctggcgcgactgtgcccgccgggctctggcgcgggaggat
ttcatcctgatggcgagcgacttcgctgccgccgacgacgtcaggctcgtcaactacatc
tgttcgcgtaccctgccccggcgtggcatccatgcgaacccggacgaggtgctcatcacg
gtcggcgcgcagaatgcgctgtggatcgtcacgcggctcatcctggaaaagggctccagc
gcggtgtgcgagaacccctgccacccggatatcagcgcctcgctgctgctcagcggcgcg
aaggtcacgaccgtcgacgtcgatggcgagggattgccgcccgacggcctgcccgacgat
accgatgcggtctttgtcacgcccagccatcactcaccgacgggcgcgaccatgccgatc
gaccggcgcacgcggctgttgcaggccgccgcggagaaggatttcgtcatcgtcgaagac
gactacgaattcgagatcagctatctcgcaccgccttccccggcgctgaaggccttcgat
tccaccgggcgcgtgctctatatcggcagcttctcgaaatcgctgtttcccggccttcgc
ctcggctatctcgtcgcccccgcgcccttcatccgcgaggcgcgcgcgctgcgttcactg
atgctgcgccacccgcccggccacctgcagcgcaccgccgcctatttcctggcactcggc
cattatgacgtggtgctgcatcgcatgcgcacggagtatcacaagcgccacgtcctcatg
gccgaggccctgcagcacgaggggctgacggtcgccggctcctcggccttcggcggcacg
tccttctggatggaggggccgcaggggcttgatgccgacaggctggtcaccgagcttcgc
caggacggcgtgctcgtcgaatccggctcgcccttcttcccgaggaacgacgagccgtgc
cgctatttccgcatgggctattcctcgatcccgcgcaccaacatcgtcgagggcgtttca
cgcgtcagggcgggtatcgatcgtctcatggacgcgtga
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