Shinella sp. HZN7: shn_22945
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Entry
shn_22945 CDS
T04278
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_22945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_22945
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
shn_22945
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ANH07005
UniProt:
A0A1A9G783
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All DBs
Position
pShin-01:118360..119946
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AA seq
528 aa
AA seq
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MRVERLIGGAMIALALASTSVLAETPKNTLVVADAIDDIITLDPGEVSEVGGVLAANQIY
QPLVSVAPDDSSKIIGVLAETWTASEDGKTYTFKMRPGLKFASGNPVTAKDAEYSLRRVV
AMKSRSAFILTQFGFSPENVEERIRATDDMTLIIEIGDTYAPSFLYYCLSSYVGGIVDSK
LVQAHEVNGDFGNAWLKAENSAGSGPYVLTRWEPKQSIMLTRNPNYTGESGGLERIFLQH
IPESAAQRLLLEKGDIDIANKLGPDDFGALEGNPDIGFVEGVSGTIYYMGLNVRNEYLAR
PKVVEALKYLVDYQGIADTISRGTMEVHQTLVPKGFLGAIDYKPYKLDIEKARALLGEAG
VSGEFTLDSVVWNTPPYTDFAQAIQATMAQAGVKLNLEVVDGQQWLERYRSASLDIWFGL
WGPDYPDPHSNGKAFAVNQKDAPDGSTGLADRFGWDAGKLSQDAMAAVREQDTDKRRAMY
EALQKTHTDTSPFLYMFQQVRKVGVKSSVKGLVLGQTFSDDRYWNVSK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtagaaagactgataggcggcgcgatgatcgcgctggcgctggcatcgaccagc
gttcttgccgaaacgccgaagaacacgctcgtcgtggccgacgccatcgacgatatcatc
acgctggatccgggcgaggtctcggaagtgggcggcgtgctggcggcgaaccagatctac
cagccgctggtgagcgtggcgcccgacgattccagcaagatcatcggcgtgctcgccgag
acctggacggcctccgaggacggcaagacctatacgttcaagatgcgcccggggctgaaa
ttcgcctccggcaatccggtgacggcgaaggacgcggaatattcgctgcgccgcgtcgtc
gcgatgaagtcgcgctcggcgttcattctcacccagttcggcttctcgccggaaaacgtc
gaggagcgcatcagggcgaccgacgacatgacgctgatcatcgaaatcggcgacacctat
gcgccgtccttcctctactactgcctctcctcctatgtcggcggcatcgtcgattccaag
ctggtgcaggcgcacgaggtgaacggcgacttcggcaatgcctggctgaaggcggagaat
tccgccggctccggcccctatgtgctgacgcgctgggagcccaaacagtcgatcatgctg
acccgcaaccccaactataccggcgagagcggcggcctggagcgcatcttcctccagcac
atccccgaaagcgctgcccagcgcctgctgctggaaaagggtgacatcgacatcgccaac
aagctcggcccggacgatttcggggcgctggaaggcaatccggatatcggcttcgtcgag
ggcgtttcgggcaccatctactatatgggcctcaacgtgcggaacgagtacctcgccagg
ccgaaggtcgtcgaggcgctgaaatatctcgtcgactaccagggcatcgccgatacgatc
tcgcgcggcacgatggaggtgcaccagacgctggtgccgaagggcttcctcggggcgatc
gactacaagccctacaagctcgacatcgagaaggccagggcgctgctcggcgaggccggc
gtctccggcgaattcacgctggattccgtcgtctggaacacgccgccctatacggatttc
gcccaggccatccaggcgaccatggcgcaggccggcgtcaagctgaacctggaagtggtc
gacggccagcaatggctggagcgctaccgttcggcgagcctcgacatctggttcggcctg
tgggggccggattatccggatccgcattccaacggcaaggccttcgccgtcaaccagaag
gacgcgccggacgggtccaccgggcttgccgaccgcttcggctgggatgccggaaaactg
tcgcaggacgcgatggccgcggtgcgcgagcaggacacggacaagcgccgggcgatgtac
gaggccctgcagaagacccataccgatacctcgcccttcctctacatgttccagcaggtg
cgcaaggtcggggtgaagagttccgtcaagggcctggtcctcggccagaccttctccgac
gaccgctactggaacgtcagcaagtag
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