Shinella sp. HZN7: shn_23275
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Entry
shn_23275 CDS
T04278
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_23275
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
shn_23275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_28
P22_Cro
HTH_30
HTH_IclR
YdaS_toxin
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ANH07064
UniProt:
A0A1A9G854
LinkDB
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Position
pShin-01:191311..192243
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AA seq
310 aa
AA seq
DB search
MPNPSLRGLQAFEAIGRCGSVSAAAADLGVSPGAVSQLVRNLEQCLGLTLLERRGRRVEL
SSWGRLYYREVAKGFQQLSHAANVLTRARNETGIVLSALTSVASRWVSRKIFDWQSLCPE
SNVRILGQDEEPRIGIEQVDFRITYGRRSYAHEHVATLFTDWVVPVCSPALIANRVLDCP
QDILKFPLLNVEWEADYKASPQWKDWASLIDADGRQTFSGLSFTLSSSAIDAAANGRGFV
LAQVSMVQDEVAAGSLVVPFDIRMKLPESYYLAWDRTALEKPFGQRFHKWLVGIAKQQDT
ISVPAQVRSS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacccgtccttgcgcggcctgcaagcctttgaggcgatcgggcgatgtggctcg
gtcagcgccgctgctgccgatctcggagtatcgcccggggcggtcagccagttggtgcga
aacctggagcaatgtctcggcttgacgctcctggagcggcgggggcggcgcgtcgagctg
tcgtcatgggggcggctgtattaccgcgaggtggcgaagggttttcagcagctttcccat
gccgccaacgttctgacgcgtgcgaggaacgagaccggcatcgtcctcagcgccttgacg
tcggttgccagcaggtgggtcagccgcaaaatcttcgactggcagtccctctgtccggaa
tcgaatgtacgcatcctcgggcaggacgaagagccgcgtatcggcattgagcaggtggat
ttccgcatcacctatggtcggcgctcttatgcccacgaacacgtcgccactctgttcacc
gactgggtcgtgccggtctgttcgcccgcgctcatcgcaaatcgcgttctcgactgtccg
caggacatcctcaagttcccgctgctcaatgtggaatgggaagcggactacaaggcttcc
ccgcaatggaaggactgggccagcttgatcgatgccgatggccggcagacgttttccggc
ctttccttcaccttgtcgagcagtgccatcgacgccgccgccaatggcaggggattcgtt
ctcgcacaagtttccatggtgcaggacgaggtcgctgccggcagtctggtggttccgttc
gatattcgcatgaagctgcccgaaagctactatctggcgtgggacaggaccgccctcgaa
aagccgttcggccagaggttccacaaatggctggttggtattgcaaagcaacaggatacc
atctcggtaccggctcaggttcggtcaagctga
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