Shinella sp. HZN7: shn_23500
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Entry
shn_23500 CDS
T04278
Name
(GenBank) 4-hydroxy-4-methyl-2-oxoglutarate aldolase
KO
K10218
4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:
4.1.3.17
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00362
Benzoate degradation
shz00660
C5-Branched dibasic acid metabolism
shz01100
Metabolic pathways
shz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
shn_23500
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
shn_23500
Enzymes [BR:
shz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.17 4-hydroxy-4-methyl-2-oxoglutarate aldolase
shn_23500
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Motif
Pfam:
RraA-like
Glyco_transf_20
Motif
Other DBs
NCBI-ProteinID:
ANH07104
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All DBs
Position
pShin-01:complement(236547..237209)
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AA seq
220 aa
AA seq
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MFVVNPMPQQIAPALIKKMEQVETATVGHFLHSGFMSRELRAVLPEKRIAGTAVTVRLPH
ADSTILHYLTKLVRPGDFIVVDRCGDDKHACWGGVVTHSMKLGGIVGAVIDGPATDFSEI
RRVDLPMWCRGPSPITTKILGLEGAINVPVSVGGQTVNPGDAIIADESGVLVLDPSKAEW
AVDKALGMQESELVLLERLRNGEKLPDISGATKIVEASAA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcgtcaatcccatgccgcagcagatcgccccggccctcatcaagaagatggaa
caggtcgagaccgccacggtcggccatttcctgcattccggcttcatgagccgcgagctt
cgcgccgtgctgcccgaaaagcgcattgccggcaccgcggtcaccgtgcgcctgccccat
gccgactcgaccatcctgcactacctgaccaagctggtgcggccgggcgacttcatcgtc
gtcgaccgctgcggcgacgacaagcatgcctgctggggcggcgtcgtgacccactccatg
aagctcggcggcatcgtcggcgcagtcatcgacggcccggcgacggacttttccgagatc
cgccgcgtcgacctgccgatgtggtgccgcggcccctcgccgatcaccacgaagatcctc
ggcctcgaaggggcgatcaacgtgcccgtctcggtgggtggccagacggtgaacccgggc
gacgccatcattgccgacgagagcggcgtcctggtgctcgacccttccaaggccgaatgg
gccgtggacaaggcgctcggcatgcaggaaagcgaactcgtcctgctcgagcgactgcgc
aacggcgaaaagctgcccgacatttccggcgccacgaaaatcgtggaagcctcggccgcc
taa
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