Shinella sp. HZN7: shn_23590
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Entry
shn_23590 CDS
T04278
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_23590
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_23590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_23590
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
shn_23590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_16
AAA_23
SMC_N
RsgA_GTPase
AAA_22
AAA_29
AAA
MMR_HSR1
AAA_30
NB-ARC
ATP-synt_ab
AAA_15
cobW
DO-GTPase2
AAA_19
NTPase_1
MobB
DUF4402
FeoB_N
RecA
TsaE
KAP_NTPase
AAA_33
Dynamin_N
AAA_13
NACHT
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ANH07119
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Position
pShin-01:complement(252497..253231)
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AA seq
244 aa
AA seq
DB search
MSETRLAVNDVSVEFTGLRALDHVSLSVLTGEVVGLIGPNGSGKTTLINAITGQVKLAGG
TITAGDITLSGLSPRKIALAGVSRSFQIVRLFNTMTVLENVEAAALAKGASRGVATERAK
NLLDELGLSAKADELGESLSYGDKRRVEIARALAAEPRFLLLDEPAAGMNDAETETLLHT
LSELPRKRGLGLLIIDHDMGLIMRLCHRLHVLASGRTIAEGDAAHVRSHPDVIEAYLGKG
AAHA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacgcgcctcgcggtaaacgacgtgtcggtggaattcaccggcctccgcgcc
ctcgaccatgtgtcgctctccgttctcaccggcgaggtcgtcggcctgatcggtccgaac
ggctcgggcaagacgacgctcatcaacgccatcaccggccaggtaaagctggcgggcggc
acgatcaccgccggcgacataaccctttccggcctctcgccgcgtaagatcgcccttgcc
ggcgtcagccgctccttccagatcgtgcgccttttcaacacgatgacggtgctggagaat
gtcgaggcggcagccctggcgaagggcgcttcccgcggggtcgccaccgagcgcgcgaaa
aaccttctcgacgaactcggcctttcggcgaaggcggatgagctgggcgaaagcctcagc
tacggcgacaagcgccgcgtcgagatcgcaagggcgctcgccgccgaaccgcgcttcctg
ctgctcgacgaacccgccgccggcatgaacgacgcggagacggaaaccctgctgcacacc
ctctccgaactgccgaggaaacgcggcctcggccttctcatcatcgatcacgacatgggc
ctcatcatgcgcctctgccaccggctgcatgtgctcgcctccggacgcaccatcgcggaa
ggggacgccgcccatgtccgcagccatcctgatgtcatcgaagcctatctcggcaagggg
gcggcccatgcttga
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integrated database retrieval system
