Shinella sp. HZN7: shn_23960
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Entry
shn_23960 CDS
T04278
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_23960
Transporters [BR:
shz02000
]
Other transporters
Pores ion channels [TC:
1
]
shn_23960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
SLH
ApeC_platyh
Motif
Other DBs
NCBI-ProteinID:
ANH07442
UniProt:
A0A1A9G8R7
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Position
pShin-01:complement(345357..347603)
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AA seq
748 aa
AA seq
DB search
MARLMVSTAAALVFSLPQAVLQPAAAQAKSARVGTMVFDIPAQPLAGALNAFGRQSGLQV
SLAAATSRGLTSRPVKGTFTPQEALSRLLEGTDTRHSVTTDGTAIVTAAHLSPLVTGSVE
DGSTTLDRITVEGEKVGDGDVSELNISARDLERKNPATIQDVFREEPSVKVGSSLPMSQK
VYVNGIEETNLAISIDGSRQNNKVFHHNATTLIDPTLLKAVSVDEGVAPADAGPGALAGS
IVYETKDVGDFLDGNGYGGFVNSGFNTNGNIFTTGLSTFGKQDGFEYLGYFNIGRGQEFS
AGNGDEVLGTRTHFQSGLGKIAYEFESGDRIELSHEAIKDNAPRPFRANMGTTTGAKPWE
PLVRDYELNRTNTVFTYTDATPEGWWDPKLVLAYGQTEVGTTVYLKPGSTPETYPVTGIT
GTFNGKFENRFHFDLGTVTAGVDFYSDKAEVEDLYEPATEKARNVGAYVQARLEPFERAR
LSFGGRADRQWFTGTTSEEWDNSGLSGNISGEYDLIADFLTAKAGYSHVWAGIPLAENFI
MNPAWVYSPEPKPTTSDNYTVGLVAKYAGFSLEGSVFRTEMENARAARYKYAFERRHVES
EGFSIGAGYDWTDGYIRVKYANIDTLIDGKPADSDTGTYLTTPVGEIITVSAAHTFADWG
LTVGGDIEIAPKYDKVPEGSPAFKAYQVVNSFVEYKPPSHQNLTLRAEVKNIFNETYADR
ATYGQEFGEVKPLYQPGRAFLLSVRATF
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggccaggctgatggtctccaccgcggccgcgctcgtcttcagcctgccgcaggcggtc
ctgcagccggcagccgcccaggcgaaatccgcccgcgtcggcaccatggtattcgatatt
cccgcgcagccgctggcgggcgcgctcaacgccttcggccggcaatccggcctgcaggtc
tcgcttgccgccgccacctcgcgcgggctgacatcccggccggtcaagggcacgttcacg
ccacaggaggcgctctcccgccttctcgaaggcaccgacacgcgccattcggtcaccacc
gacggcacggcgatcgtcaccgccgcgcatctctccccgctcgtcaccggttccgtggaa
gacggatcgacgacgctcgaccggatcacggtcgagggcgaaaaggtcggcgatggcgac
gtcagcgagctgaacatttccgccagggacctggaacgcaagaaccccgccaccatccag
gacgtcttccgtgaggagccgagcgtcaaggtgggctcctctctgcccatgtcgcagaag
gtctatgtcaacggcatcgaggagaccaatcttgcgatctccatcgatggcagccgccag
aacaacaaggtcttccaccacaatgcgacgacgctgatcgacccgacgctgctgaaggcc
gtcagcgtcgacgagggcgtggcgccggccgatgccggcccgggcgcgcttgcgggctcc
atcgtctacgaaaccaaggatgtcggcgatttcctcgacggcaacggttacggcggtttc
gtcaattccggcttcaacaccaacggcaacatcttcaccacgggcctttcgaccttcggc
aagcaggacggtttcgaatatctcggctatttcaacatcggccgcggccaggagttttcc
gccggcaatggcgacgaggtgctcggcacgcgcacgcatttccagagcggcctcggcaaa
atcgcctatgaattcgagagcggcgatcgcatcgagctgagccacgaggcgatcaaggac
aatgcgccgcgcccgttccgcgccaatatgggcacgacgaccggggcaaaaccctgggag
ccgctggtgcgcgactatgaactcaaccgcaccaacacggtcttcacctacacggacgcg
acgcccgagggctggtgggatccgaagctggtgctcgcctatggccagacggaggtcggc
acgaccgtctatctcaagcccggcagcacgccggaaacctatccggtcaccggcatcacc
ggcacgttcaacggcaagttcgagaaccgcttccatttcgacctcggcacggtgacggcc
ggcgtcgacttctacagcgacaaggcggaagtggaagacctctacgaacccgctaccgag
aaggcgcgcaatgtcggcgcctatgtgcaggcgcggctggagcccttcgagcgggcgcgc
ctctccttcggcggtcgtgcggaccggcaatggttcaccggcaccaccagcgaggaatgg
gacaattccggtctcagcggcaacatttccggcgaatacgacctcatcgcggatttcctg
accgccaaggccggctactcccatgtctgggccggcatcccgctcgccgagaacttcatc
atgaaccccgcctgggtctattcgcccgagccgaagccgacgacgtccgacaactacacg
gtcggcctcgtcgcgaaatatgccggcttctcgctggagggctcggtgttccgcacggaa
atggagaatgcccgcgcggcgcgctacaaatatgccttcgagaggcggcatgtggaatcg
gagggtttttcgatcggcgccggctatgactggaccgacggctacatccgtgtgaaatac
gccaatatcgacacgctgatcgacggcaagccggccgattccgataccggcacctacctc
acgacgccggtcggcgagatcatcacggtctccgccgcccataccttcgccgactggggc
ctcaccgtcggcggcgatatcgagatcgcgccgaaatacgacaaggtcccggagggcagc
cccgccttcaaggcctaccaggtcgtcaacagcttcgtcgaatacaagccgccgagccac
cagaacctgacgctgcgcgccgaggtgaagaacatcttcaacgagacctatgccgaccgc
gccacctacggccaggaattcggcgaggtgaagccgctctaccagccgggccgcgcgttc
ctgctgagcgtacgcgccacgttctga
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