Shinella sp. HZN7: shn_24415
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Entry
shn_24415 CDS
T04278
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_24415
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
shn_24415
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
HTH_3
HTH_Tnp_ISL3
Fe_dep_repress
MerR
Motif
Other DBs
NCBI-ProteinID:
ANH07455
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Position
pShin-01:complement(446819..447847)
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AA seq
342 aa
AA seq
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MRKPPRHRRKMQSVTMSDVAELANVSPSTVSLFLRKPEAVSATASQAISRAIDKLNYVPN
LMAGGLAAASSRAVSILVPSVRNAFFAETVSSMQTALKKQRLQLILGHTEYDEQEEEELV
RMALSWAPAAIVLTGLSHSAATRRLLANVAIPVIEIWELGGPQIDAAIGFHHDQVGIAAA
EHLVRQGRRNLLFLGARMHQDRRARQRCNGFLQAARVTGAAAKVVEHPDTASAEIGSMLL
AEALRLHPETDGIACSNDHIALGVLFACERQKIAVPDRLAVIGFGDLSFSAACNPPLTTI
RPSGDLIGREAARLIEEHLHGEKADAHRTIDTRFTLQHRRSS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagccgccgcgccatcgccgcaagatgcagtccgtcacgatgtccgacgtggcc
gagctcgccaatgtctccccctccaccgtgtcgctcttcctgcgcaagcccgaggcggtt
tcggcgactgcgagccaggcgatcagccgggcgatcgacaagctcaactatgtgccgaac
ctcatggccggcggcctggccgctgcgtcctcccgcgccgtcagcatcctcgtgccttcg
gtgcgcaatgccttcttcgccgagacggtctcttccatgcagacggcgctcaagaagcag
cgcctgcagctcattctcggccataccgaatatgacgagcaggaagaggaggaactggtc
cgcatggcgctctcctgggcgccggcggcgatcgtcctgaccggcctttcgcacagcgcg
gcgacgcgccggctgctggccaatgtcgccatccccgtcatcgagatctgggagctgggc
ggcccgcagatcgacgccgccatcggcttccaccacgatcaggtcggcatcgcggcggcg
gagcacctggtccggcagggccgtcgcaaccttctcttcctcggcgcgcgcatgcaccag
gaccgccgcgccaggcagcgctgcaacggcttcctgcaggcggccagggtgaccggagcg
gctgcgaaagtcgtcgagcatcccgacacggcctccgccgaaatcggctcgatgctgctg
gcggaagccttgcgactccaccccgagaccgatggcatcgcctgctcgaacgaccatatc
gcgctcggcgtgctctttgcctgcgagcgccagaagatcgccgtgccggaccggctcgcc
gtgatcggctttggcgatctcagcttcagcgccgcctgcaacccgccgctcaccacgatc
cgtccgtccggcgacctgatcggccgggaggctgcaaggttgatcgaagagcacctgcac
ggcgaaaaagcggacgcacatcgcacgatcgacacccgcttcacgctgcagcaccgccgc
agcagctag
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