Shinella sp. HZN7: shn_25115
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Entry
shn_25115 CDS
T04278
Name
(GenBank) putrescine/spermidine ABC transporter substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_25115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_25115
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
shn_25115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ANH07467
LinkDB
All DBs
Position
pShin-01:590761..591801
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AA seq
346 aa
AA seq
DB search
MKTKWMTTTATAAIAMLFAANAASAAGQLNIYNWGDYTNPELIKKFEEKFDVKVTVTDYD
SNDTALAKVRAGGHGFDVVVPSANYVQIWIKEGLLQEARPDQMENFKNVDERWVDVPWDP
GRHYTVPWQWGLTGIGVNTSVYKGDINTSAIFLDPPEELAGKINVAPEMNDVLFATIKYF
GGDWCTTDKDVLRKVRDKLVEAKTKWLAMDYSVTEKLPAGDYAAVYYWNGAIMRSRIKNA
DIKFGYPKEGFPYFMDSVALLKDAKNTENAKLFMNFIMEPENAALISAFAKYSNGVKGSE
QFLPADMQDAPELVVPAEFQPAGEFLASCEPDVQQLYTRIWTELQK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaaatggatgacgacgacagcaacggcggcgattgccatgctgttcgcggcg
aatgccgcttcggcggccggccagctcaacatctacaactggggcgactacaccaatccg
gagctgatcaagaagttcgaggagaagttcgacgtcaaggtcacggtcaccgactacgat
tcgaacgacacggcgcttgccaaggtccgcgccggcggccacggtttcgatgtcgtcgtg
ccctcggcgaactacgtgcagatctggatcaaggaaggcctgctgcaggaagcccggccg
gaccagatggagaacttcaagaatgtcgacgagcgctgggtcgacgtgccgtgggatccg
ggccgccactacaccgttccgtggcagtggggcctgaccggcatcggtgtcaacacctcg
gtctacaagggcgacatcaacacctcggcgatcttcctcgatccgccggaggaactggcc
ggcaagatcaacgtcgcgccggagatgaacgacgtcctcttcgccaccatcaagtatttc
ggcggtgactggtgcacgacggacaaggacgtcctgcgcaaggttcgcgacaagctcgtc
gaagcgaagacgaaatggctcgccatggactacagcgtgaccgagaagctgccggccggc
gactatgccgccgtctactactggaacggcgccatcatgcgctcgcgcatcaagaatgcg
gacatcaagttcggctacccgaaggagggcttcccctacttcatggacagcgtcgcgctc
ctcaaggacgcaaagaacaccgagaacgccaagctgttcatgaacttcatcatggagccg
gagaatgcggccctgatctccgccttcgccaagtattccaacggcgtcaagggatcggag
cagttcctgccggccgacatgcaggatgcgccggaactggtcgtgccggctgaattccag
cccgcgggcgagttcctcgcaagctgcgaacccgacgtacagcagctctataccaggatc
tggaccgaactgcagaagtaa
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