Shinella sp. HZN7: shn_25520
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Entry
shn_25520 CDS
T04278
Name
(GenBank) Fe3+/spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_25520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_25520
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
shn_25520
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Motif
Pfam:
ABC_tran
TOBE_2
nSTAND1
Cytochrom_C550
SMC_N
nSTAND_NTPase5
nSTAND3
bpMoxR
AAA_29
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANH07519
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Position
pShin-02:complement(55807..56943)
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AA seq
378 aa
AA seq
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MNTMTLERGRLDEAPPTADAAETMVAFERVQKTYDGRTLVVEDLNLAVRRGEFLTMLGPS
GSGKTTTLMMLGGFEQPTSGRILLGGQAVERLPPERRDIGFVFQNYALFPHMTVRENVGF
PLRYRGVKGAEAGRRIEEALALVKLTGLGERRPAQLSGGQQQRVALARAMVFNPKLILMD
EPLGALDKQLREHMQVEIRKIQQRLGITMVYVTHDQSEALTMSDRIAVFHEGRIQQLSDP
VTLYDRPENRFVADFIGDNNTLSCEFAGTENGRSVVRMPDGTRLLATGPSGQARSDLTVS
LRPERIGLDSPDRKNAENRIAARVLDRTFLGDRVRLTLEAFGSERLVASVPAAEGAAILP
GSRIAMACFAADCRTLTR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgatgacgctggaaagggggcgcctcgacgaggcgccgccgaccgcagacgcg
gccgagaccatggtcgccttcgagcgcgtgcagaagacctatgacgggcgcacgctcgtc
gtcgaggacctgaacctcgccgtgcggcgcggcgagttcctcaccatgctgggcccttcc
ggttccggcaagacgacgacgctgatgatgctcggcggcttcgagcagccgacgagcggg
cgcatcctgcttggggggcaggccgtggagcgcctgccgccggagcgccgcgacatcggc
ttcgtcttccagaactatgcgctcttcccgcatatgacggtcagggaaaatgtcggcttc
ccgctgcgctatcgcggcgtgaagggcgccgaggcgggccggcggatcgaggaggcgctt
gcgctggtcaagctcaccgggcttggcgagcgccgtccggcacagctttccggcggccag
cagcagcgcgtggcgctcgcccgcgccatggtgttcaacccgaaactcatcctgatggac
gagccgctcggcgcgctcgacaagcagttgcgcgagcacatgcaggtcgagatccggaag
atccagcagcgcctcggcatcaccatggtctatgtgacgcacgaccagtcggaagccctc
accatgtccgaccgcatcgccgtcttccacgaagggcgcatccagcagctttccgacccg
gtgacgctctacgaccggccggaaaaccgcttcgtcgcggacttcatcggcgacaacaac
acgctttcctgcgaattcgccggcacggagaacggccgcagcgtcgtgcggatgccggac
ggaacacggcttcttgcgaccgggccttccggccaggcgcgatccgacctcacggtctcg
ttgcggcccgagcggatcgggctcgacagcccggaccgcaagaacgccgaaaaccgtatt
gcggcgcgcgtgctcgacaggaccttcctcggcgaccgggtgcggctgacgctggaggcc
ttcggcagcgagcggctcgttgcctcggtgcccgcggccgagggcgcggcgatcctgccg
ggaagccgcatcgcgatggcctgttttgccgccgactgccgaacgctgacgaggtag
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