Shinella sp. HZN7: shn_25555
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Entry
shn_25555 CDS
T04278
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
shz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_25555
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
shn_25555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_25555
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
shn_25555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
XPC-binding
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ANH07525
UniProt:
A0A1A9G8S3
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Position
pShin-02:65035..66051
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AA seq
338 aa
AA seq
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MQRAFVKRTALAAAVLAAGLGWAVAQDKGLENPRSTAFHTSLKDKKVVFVPLSMGFDLTE
GWAAQMRRQAERLGYGFEIRDPAWSTDAGTRAIQSLITEKPDLMVIHNPDIQSYARLLKQ
AQAEGIKIVQINLESNTTTDSYVGADWTEIGRKAAEAVVARCDAGKGVSTKVAIDTGVPT
AASDVFQLDGIYEVLDAHPDIQVVSQQATEYNPEKARSIMATVLQQHPDLCGAIGIWDNQ
DTGTASAIKEAGKSDQVFLVTSGGGNSVGCENVEKGLFNLYISYNVPLQGDLLNQEIVRL
LMSEGAAGESKAIYFNPLTLITKDNVNQRNCWTLDDLK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgcatttgtgaagagaacggcgctcgccgcagcggtactcgccgccggcctc
ggctgggcggtggcacaggacaagggactggagaatccgcgcagcaccgcgttccatacg
tcgctcaaggacaagaaggtggtgttcgtgccgctctcgatgggcttcgacctgacggaa
ggctgggcggcgcagatgcgcaggcaggccgagcggctcggctacggcttcgagatccgc
gatccggcctggagcacggatgcaggcacgcgggcgatccagtcgctgatcaccgagaag
ccggacctgatggtgatccacaatcccgatatccagtcctacgcgcgccttctcaagcag
gcgcaggccgagggcatcaagatcgtccagatcaatctcgaatccaacaccacgaccgat
tcctatgtcggagccgactggacggagatcggcaggaaggcggccgaggcggtggtcgcc
agatgtgacgcgggcaagggcgtttccaccaaggtggcgatcgatacgggcgtgccgacg
gcggcctccgacgtcttccaactcgacggcatctacgaggtgctggacgcccatcccgat
atccaggtcgtctcgcagcaggcgacggaatacaatccggaaaaggcgcgctcgatcatg
gcgaccgtgctgcagcagcatccggacctgtgcggcgcgatcggcatctgggacaatcag
gataccggcacggcatcagcgatcaaggaagccggcaagagcgaccaggtctttctggtc
acctcgggcggcggcaacagcgtcggttgcgagaatgtcgagaagggcctcttcaatctc
tacatcagctataacgtgccgctgcagggcgatctcctgaaccaggaaatcgtgcggctg
ctgatgtccgagggggcggcgggggaaagcaaggccatctatttcaatccgctgacgctc
atcaccaaggacaacgtcaaccagcgcaattgctggacgctcgacgatctgaaatag
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