Shinella sp. HZN7: shn_25560
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Entry
shn_25560 CDS
T04278
Name
(GenBank) ABC transporter permease
KO
K10440
ribose transport system permease protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_25560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_25560
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
shn_25560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Str_synth
SSL_N
SGL
Motif
Other DBs
NCBI-ProteinID:
ANH07526
UniProt:
A0A1A9G8Y4
LinkDB
All DBs
Position
pShin-02:66065..68176
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AA seq
703 aa
AA seq
DB search
MAGRNALIRFRYRYLSGRLVGEVLSKSWIDAAIPVVALLVTIGIMSFLIPGLLGAGHIAD
LARQLAEFGLIALALTIVIMSGGIDLSVGSMFALCVLAALVGMNVLGLPFPAALAITLAA
GGACGLLNGVLIGYLRLRAFITTLVTLVIFRALYDIVFPRLASAIVGSTPDSAAWDYLGF
GKVQGLPVSFVIFAVIAVAIHVTLSRLRPGWRLRAVGGARRSAYNAGINVKRTVCLAYVT
SGLLTAIAAFLFSARLGSTGADTGIGLEIAVLTAVVLGGVSLGGGRGSVGGAIVGATLVL
ILTNGLIRLSTPGSVNQLLLGVILILAVLFDAKWVKNRGKILSKVYVSPAYLDLPERART
KDDPFALNDRLRDVELIGLGAVEGPEDVVLDGQDNLYTGTRHGTIVRFLAPDYVRSEVFA
RIGGHPLGLAFAENGDLLACVGGMGVYRVNPEGAVSCVTDETNRSWFSVIDDSRLRLPDD
LDIAPDGRIFFSEATIRYEMADWILDALEGRGNGRLICHDPATGRTRTVLGGLIFPNGIT
ICRDGQSLLFAETWACRVSRYWFDGPHKGRREVVLADLPGYPDNINRGANGTYWIALLGL
RTPTFDLAMRKPAFRRRMARRIAADEWLFPNVNRGCVMRIAENGAVLDVLWDAAGENHPS
ITSTCEHKGYLYLGGVSNNRIGRIRLPDTDPAWTAQRDYWGMT
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaggaacgcgttgatccgcttccggtacagatatctctccggccgcctggtg
ggagaggtcctgtccaagagctggatcgatgccgcaatccccgtggtcgcccttctggtg
acgatcggcatcatgtccttcctgatccccggccttctgggcgcgggccacatcgccgac
ctcgcgcgccagctcgccgagttcggcctgatcgcgctggcgctgacgatcgtcatcatg
tccggcggcatcgacctgtccgtgggctcgatgttcgcgctgtgcgttctcgccgcgctg
gtcggcatgaacgtgctcggcctgccgtttccggcggcacttgcgatcacgctggccgcc
gggggtgcctgcgggctgctgaacggcgtgctgatcggctatctgcggctgcgcgccttc
atcaccacgctcgtgacgctcgtcatcttccgggccctctacgacatcgtctttccaagg
ttggcgagcgcgatcgtcggcagcacgccggattcggcggcctgggattacctcggcttc
ggcaaggtccagggccttcccgtctccttcgtgattttcgccgtgatcgccgtcgcgatc
cacgtcacgctctcgcggctgcggccgggctggcggctgcgcgccgtcggaggtgcccgg
cgatcggcctacaatgccggcataaacgtcaagcgcacggtgtgcctggcctatgtcacc
tccggcctgctgaccgccatcgcggccttcctgttttccgcccgcctcggcagcaccggc
gccgatacgggcatcggcctggagatcgccgtgctgacggcggtcgtgctgggcggcgtt
tcgctcggcggcgggcgcggctccgtcggcggtgcgatcgtcggggcgaccctcgtgctg
atcctgaccaacggcctcatccggctttcgacgcccgggtcggtcaaccagctcctgctc
ggcgtgatcctgatcctggccgtgctcttcgatgccaaatgggtgaagaaccgcggcaag
atcctcagcaaggtctatgtctctcccgcctatctcgaccttcccgaacgggcgcggaca
aaggacgacccgtttgcgctcaacgatcgccttcgcgacgtcgagctgatcggcctcggc
gcggtagaaggaccggaggacgtcgtcctcgacgggcaggacaatctttacaccgggaca
cggcatggcacgatcgtgcgtttccttgcccccgactatgtcagaagcgaggtctttgcg
cggataggcggacatccgctcggcctcgccttcgccgagaacggcgatcttctggcatgc
gtcgggggcatgggcgtatacagggtcaatccggaaggcgccgtctcctgcgtcacggac
gagaccaaccggagctggttctccgtcatcgacgattcccggctcaggttgcccgacgat
ctcgacatcgcgccggacggacgcatcttcttcagcgaggcgacgatccgctacgaaatg
gcggactggatactcgacgcgctggaagggcgcggcaacggccgcctgatctgccacgat
ccggcgacgggccggacgcggaccgtcctcggcggcctgatcttccccaacggcatcacc
atctgtcgcgacggccagtccctgctttttgccgagacctgggcctgccgggtctcgcgc
tactggttcgacgggccgcacaagggtcggcgggaggtcgtcctggccgatcttcccggc
tatccggacaacatcaaccgcggcgcgaacggcacctactggatcgcgctcctcggcctg
aggacgccgacattcgaccttgccatgcgcaagccggcctttcgccggcgcatggcgcgg
cggatcgccgccgacgaatggctgtttccgaacgtcaaccgcggctgcgtgatgcggatc
gcggaaaacggcgcggttctcgacgtgctgtgggacgcggccggcgagaaccatccgtcg
atcacctcgacctgcgagcacaagggctacctctatctcggaggcgtttccaacaaccgc
atcggccgcatccgccttccggatacggaccccgcctggacggcgcagcgcgactactgg
gggatgacgtga
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