Shinella sp. HZN7: shn_25735
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Entry
shn_25735 CDS
T04278
Name
(GenBank) hypothetical protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_25735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_25735
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
shn_25735
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA_29
nSTAND_NTPase5
AAA_16
AAA_22
nSTAND1
AAA_25
AAA_15
AAA_23
RsgA_GTPase
nSTAND3
Rad17
Motif
Other DBs
NCBI-ProteinID:
ANH07550
LinkDB
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Position
pShin-02:99889..100959
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AA seq
356 aa
AA seq
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MEGVNKVFGNFTALSDVSIDVREGEFLTLLGPSGSGKSTTLMCLAGFETLTRGRILYRGE
DVTRLSPEKRGLGVVFQGYALFPHMTVAENVGYPLVVRKVPKAERDANIRAMLSTVGLGG
YEDRRILGLSGGQQQRVALARALIFGPKLLLLDEPFSALDRSLRGEMQSELARIHKELGT
AFVFVTHDQDEALSLSDRIAVFNKGKMEQVASPSDIYEAPASTFVAGFVGKTNLLDVTDL
VAGNGNGLYRARYGDVEIICKGPEHLAHAGSGKLSVRAEEAELHASAPASADLNAIKVRL
LRSVYFGGWVEALLEDSAGKLFSVRLTTTRARHTGLQDGRDYWLSWPKGTGYLVPA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgtcaacaaggtattcggcaacttcacggccttgagcgacgtcagcatcgat
gtgcgcgaaggagagtttctcacgctcctcggaccttccggttccggcaagagtaccacg
ctcatgtgtcttgccggcttcgagacgctgacgcgcgggcgcatcctctatcgtggcgag
gacgtcacgcgcctgtcacccgaaaagcgtggcctcggcgtcgttttccagggctacgcg
ctttttcctcacatgacggtcgccgaaaatgtcggttacccgctggtcgtccggaaagtc
ccaaaggccgagcgtgacgcgaacatccgggccatgctgtcgaccgtcggccttggcggc
tatgaggatcggcgcatcctgggcctttccggcggccagcagcagcgcgtcgcccttgcg
cgtgcgctgatcttcgggccgaagctcctgcttctggacgagccgttctccgccctcgac
cgcagtctgcgcggtgagatgcagtcggagctggcgcgcatccacaaggaactcggcacg
gccttcgtcttcgtgacgcatgatcaagacgaggcgctttcgctctccgaccgcattgcc
gtcttcaacaaggggaagatggagcaggtcgcatcgccaagcgacatctacgaggcgccg
gcctcgacattcgtcgccggcttcgtcggcaagacgaaccttctcgacgtcaccgatctc
gtggcaggcaacggcaacggtctctatcgcgcccgctatggagacgtcgaaatcatctgc
aaggggccggagcatctggcgcatgctgggtcgggcaagctcagcgtgcgagccgaagag
gccgagctgcatgcttccgcacccgcaagcgccgatctcaacgccatcaaagtccggctg
cttcgctcggtctatttcggcggatgggtggaagcgctgctcgaagattccgccggcaag
ctcttcagcgtgcgcctcacgacgacgcgagcccgccataccggccttcaggacggccgg
gactactggctgagctggcccaagggtaccggctatctcgttcctgcatga
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