Shinella sp. HZN7: shn_26190
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Entry
shn_26190 CDS
T04278
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_26190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_26190
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
shn_26190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
DUF7457
Motif
Other DBs
NCBI-ProteinID:
ANH07632
UniProt:
A0A1A9G9B9
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Position
pShin-02:198699..199745
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AA seq
348 aa
AA seq
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MTYRRFFGGLGMLAVLAGAPAAFADAGRLTVVGAGGVLQDAERKAFFEPFAAASGVVLTE
DSYSGQMAKVRAMVDSGSVSWDVMQVEQNTLLSGCAEGLFEELDWSRIGKREDFIPEAYS
DCGVGAFVWSMVPSYDKAKLADGPKTWADLWNVEKWPGKRGFRQTAKMTLEIALLSDGVA
KDAVYDVLATDEGQDRAFAKLDEIKSSILWWTTGAESVERLAAGDVVATATFNGRVAAAN
ASGKDFALIWDGQVFGIDYWGIVKGSPNRENAEKFIAFASTESAQAAFPQHIAYGVTNLA
AIRGVKPEIAKDLPTTEANMAAAVALDTEFWADHGEALEARFATWRAQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacgtatcgtaggttcttcggcgggctgggcatgctcgccgtcctggcgggtgcgccc
gccgcctttgccgatgccggcagattgaccgtcgtcggggccggcggcgtgctgcaggat
gccgagcgcaaggccttcttcgagcccttcgcggcggcgtccggcgtggtgctgacggaa
gattcctattccgggcagatggccaaggtgcgcgccatggtcgacagcggcagcgtttcc
tgggatgtcatgcaggtggagcagaacaccctcctgtcgggctgcgccgagggccttttc
gaggaactcgactggagcaggatcggcaagcgggaggatttcattcccgaagcctatagc
gattgcggcgtcggcgccttcgtctggtcgatggtgccgagctacgacaaggcgaagctc
gcggatgggccgaagacctgggccgacctgtggaatgtcgagaaatggcccggcaagcgc
gggttccgccagacggccaagatgacgctcgaaatcgcgctcctctcggacggcgttgcc
aaggacgcggtctatgacgtgcttgccacggacgagggccaggaccgcgccttcgccaag
ctcgacgagatcaagtcatcgatcctctggtggacgacgggcgcggaatccgtcgagcgc
cttgccgccggcgacgtcgtcgccacggcgaccttcaacggccgcgtcgctgcggccaac
gcctccggcaaggacttcgccctcatctgggacgggcaggtcttcggcatcgactactgg
ggcatcgtgaagggctcgcccaaccgggagaatgcggagaagttcatcgccttcgcctcg
accgagagcgcccaggcggccttcccgcaacatatcgcctacggcgtcaccaaccttgcg
gccatcaggggcgtcaagccggagatcgcaaaggatcttccgaccaccgaggcgaacatg
gccgcggccgtggcgctcgacacggaattctgggccgatcatggcgaggcgcttgaggcg
agatttgcgacatggcgcgcgcaatga
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