Shinella sp. HZN7: shn_26200
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Entry
shn_26200 CDS
T04278
Name
(GenBank) polyamine ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_26200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_26200
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
shn_26200
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Bacteriocin_IId
Motif
Other DBs
NCBI-ProteinID:
ANH07634
LinkDB
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Position
pShin-02:201020..201823
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AA seq
267 aa
AA seq
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MPVALRRVQIAFCCLAMVFLIGPTLVIIPISFSSANFLSYPLPGFSLQWYEKILQPQPWM
SALLNSLIIGVGATLVSTVLGTLAALGMSRGRLPARSMILAVVISPMIVPVVISGVGMYF
FFARLGLVASFLGLVLAHAVLAVPFVLITVTATLKNFDMNLVRAAASLGASPFHAFRTVT
LPLIAPGVISGALFAFVFSFDEVVVALFISGPGQRTLPRQMFDGLRDNIDPSILAMSTLL
VIISIVLMGGGALAQKRAAANRSIANL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgccttgagacgcgtgcagatcgccttctgctgcctcgcgatggtcttcctg
atcgggccgacgctcgtcatcatcccgatctccttcagctcggccaacttcctgtcctat
ccgttgccgggcttttccctgcaatggtacgagaagatcctgcagccgcagccctggatg
tcggcgctcctcaacagcctgatcatcggcgtgggcgcgacgctggtctccacggtgctg
ggcacgctggcggcgctcggcatgtcgcgcggccggcttccggcccgctcgatgatcctc
gcggtggtgatctcgccgatgatcgtgcccgtcgtcatcagcggcgtcggcatgtatttc
ttcttcgccaggctggggctcgtcgcgtccttcctgggcctcgttctcgcccatgcggtc
ctggcggtgcccttcgtgctgatcacggtcaccgccacgttgaagaatttcgacatgaac
ctcgtgcgggcggcggcgagcctcggcgcgagcccgttccatgccttccgcacggtgacg
ctgccgctcatcgcgccgggcgtcatctcgggcgcgctcttcgccttcgtcttctcgttc
gacgaggtcgtggtcgcgcttttcatcagcgggccgggccagcgcacgctgccgcgtcag
atgttcgacggcctccgggacaatatcgatccgtcgatcctggcgatgtcgacattgctc
gtgatcatctccatcgtcctgatggggggcggtgccctggcgcagaagcgcgcggcggcg
aaccgttcgattgccaatctgtag
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