Shinella sp. HZN7: shn_27825
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Entry
shn_27825 CDS
T04278
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_27825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_27825
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
shn_27825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ANH07955
UniProt:
A0A1A9GA45
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All DBs
Position
pShin-03:132182..133414
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AA seq
410 aa
AA seq
DB search
MFKSEINRRSLLKRSAGVMALAMGGGTPFLSSRMAFAQAADLAGQQLRTIGLSVTVQERI
LEEFKKASGVGGTSGTAATFPDAQTKILSGSKDYDCWEIIAERLPSIVMTDNVETIPAAS
LKNWANIRDTFTTASDKWDRAAQIVGQIWADEGQTVLNMVPAVYNYDSIGYNPDVLSDEE
ANTWTAIFDAKWKGKSGLNTDPLIAFGQAIMAMNTLGLSDVKNPGNPTAAEIDEAAAFLV
SKKKEGQFRALWGDFGELVNLMASGEMVVCDAWQPAVMAVKAQGKACKYAVPKEGYRGWA
IGPSMIAGTANRDAVIAYADYWLSGEPGITVSEQGYYSPSTNIKDVMSPEKYAFWYEGKP
WVGAEERGIKEGDLRDGGSLEERAKNVAYWHQWPDEYDHLIQKWDEFLNA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtcggaaatcaatcgccgctcgctcctcaagcgctcggccggggtgatggcg
ctggcgatgggcggcggcacgccgttcctctcctcgcgcatggccttcgcgcaggccgct
gacctcgccggccagcaactgcgcaccatcggcctttccgtgacggtgcaggagcgcatc
ctcgaggagttcaagaaggcctccggcgtcggcggcacctcgggcaccgccgccaccttc
ccggacgcgcagacgaagatcctctcgggctcgaaggactacgactgctgggagatcatc
gccgagcgcctgccctccatcgtcatgaccgacaatgtcgagacgatcccggccgcctcg
ctgaagaactgggccaatatccgcgacaccttcaccacggcgagcgacaagtgggaccgt
gccgcgcagatcgtcggccagatctgggcggacgagggccagaccgtgctcaacatggtg
cctgccgtctacaactacgattccatcggctacaatccggacgtgctctccgacgaagag
gccaacacctggacggcgatcttcgatgcgaagtggaagggcaagtcgggcctcaacacc
gacccgctcatcgccttcggccaggccatcatggcgatgaacacgctcggcctctcggat
gtgaagaaccccggcaacccgaccgccgccgagatcgacgaggccgccgccttcctcgtc
tccaagaagaaggaaggccagttccgcgcgctctggggcgatttcggcgagctggtcaac
ctgatggcctcgggcgagatggtcgtctgcgacgcctggcagccggcggtgatggccgtc
aaggcgcagggcaaggcctgcaagtacgccgtgccgaaggaaggctatcgcggctgggcg
atcggcccgtcgatgatcgccggcacggccaaccgcgacgccgtcatcgcctatgccgac
tactggctctcgggcgagcccggcatcaccgtctccgaacagggctattattcgccctcc
accaacatcaaggatgtcatgtccccggagaaatacgccttctggtacgagggcaagccc
tgggtcggcgcggaggagcgcggcatcaaggagggggacctgcgcgacggcggctcgctg
gaggagcgcgcgaagaacgtcgcctactggcaccagtggccggacgaatacgaccatctc
atccagaaatgggacgaattcctcaacgcctga
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