Shinella sp. HZN7: shn_28030
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Entry
shn_28030 CDS
T04278
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_28030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_28030
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
shn_28030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ANH07991
LinkDB
All DBs
Position
pShin-03:178137..179252
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AA seq
371 aa
AA seq
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MSHDKLSSMQIRRRTLLASMAAAGASAGLSTLGVSRAFAQEPEKPAEIIVRAWGGSWVDA
LKAGVSDSFTKATGIAVRHDLTEDNEIQPKVWAAVAQKRVPPIHVNWDTTTNATKSALRG
VTEDLSDLPNLKDTTELAKPVGLDGYPIVNTYGYVYVLAYRPSAFPNGAPKSWKDLLDPK
LKGRIALYNDGIGFHFPAQVAGGGKLEDIPGNMQPAWDFIAKIKDQQPLLGEDPDFTTWF
QKGEIDAACTISTNAREAKKNGIELAWVVPEEGAKFDTDGLWIPKGLPENELYWAKQYIN
HALTREAQQVWLDGLGLPGVVPGLTPPADLVDDPSYPVTEEAFEHLIRISSKVQVENESQ
WFAKFKEIMQG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgataaattgtcatccatgcagatccgtcgccgcacgctgctggcatcgatg
gccgcggcgggtgcgtccgcaggtctttcgacgctgggtgtcagccgcgcttttgcccag
gagcccgaaaaaccggccgaaatcatcgtccgcgcctggggtggcagttgggtcgacgcg
ctgaaggccggcgtttccgacagcttcaccaaggccaccggcattgcggttcgccatgac
ctgaccgaagacaacgagatccagccgaaggtgtgggccgccgtcgcccagaagcgcgtg
ccgccgatccatgtgaactgggacacgaccaccaacgccaccaagtcggcgctgcgcggc
gtgacggaggacctgtcggacctgccgaacctcaaggacaccaccgagcttgccaagccc
gtcgggctcgacggctatccgatcgtcaacacctatggctatgtctacgtgctggcctat
cgcccctcggccttcccgaacggtgcgccgaagtcctggaaggacctgctcgatcccaag
ctcaagggccgcatcgcgctctataacgacggcatcggcttccacttcccggcccaggtt
gccggcggcggcaagctggaggatatccccggcaacatgcagccggcctgggacttcatc
gcgaagatcaaggatcagcagccgctgctcggcgaggacccggacttcaccacctggttc
cagaagggcgagatcgacgccgcctgcaccatttcgaccaatgcgcgcgaagctaagaaa
aacggtatcgagctggcctgggtggtgccggaagagggcgcgaagttcgatacggacggc
ctgtggatcccgaagggcctgccggaaaacgaactctactgggccaagcagtacatcaac
catgcgctgaccagggaagcccagcaggtctggctcgacggtctcggcctgcccggtgtc
gtgcccggcctcaccccgccggccgacctcgttgacgatccgtcctatccggtgacggaa
gaggccttcgagcacctcatccgcatctcgtccaaggtgcaggtcgaaaacgagagccag
tggttcgccaagttcaaggaaatcatgcagggctga
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