Shinella sp. HZN7: shn_28115
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Entry
shn_28115 CDS
T04278
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_28115
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
IclR family
shn_28115
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GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR
MarR_2
TrmB
MksE
Motif
Other DBs
NCBI-ProteinID:
ANH08207
UniProt:
A0A1A9GAP9
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Position
pShin-03:complement(195103..195852)
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AA seq
249 aa
AA seq
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MSTIGKALSLLDLISELDKDIGLSDLARLSALDKATARRFLVELERHGFVEQDEETRRYR
LGAAPVRLARLRQARFPFVAVAAPFVKALAEEAGETVHLSEFSGGRLSTIHVEDSAQAHR
VIVDPGAVLPFHATASGLAYLAFLPPGEIDRALARPLERFSAHTATDADAVRTLLRETVE
RGYSISQQGFEIGVISAAAPILTPGGRPMGALAVAAPTARADMARMHEIGRKAAAAARGI
AEKYYGGRT
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatcggaaaggccctttccctcctcgacctgatttccgaactcgacaaggat
atcggcctcagcgacctcgcgcggctttccgcgctcgacaaggcgacggcgcggcgcttc
ctggtggagctggaaagacacggcttcgtggaacaggacgaggagacgcgccgctaccgc
ctcggcgcggcacccgtccggctggcccgcctgcgccaggcgcgtttccccttcgtcgcc
gtggccgcccccttcgtcaaggcgctggcggaagaggccggcgagacggtgcacctgtcg
gaattttccggcgggcggctctccaccatccatgtggaggattccgcgcaggcgcaccgc
gtgatcgtcgatcccggggccgtgctgcccttccacgccaccgcatcggggctcgcctat
ctcgccttccttccccccggcgagatcgaccgggcgctggcgcggccgctggagcgcttt
tccgcccatacggccacggatgcggacgccgtgcgcacgctcctgcgcgaaacggtggag
cggggctattcgatcagccagcagggcttcgagatcggcgtcatcagtgccgcagcgccg
atcctcacgcccggcgggcggccgatgggcgcgctggcggtggcggcgccgaccgcgcgc
gccgacatggcccgcatgcacgagatcggccggaaagccgccgccgccgcccgcggcatc
gcggagaaatactacggcggccggacctga
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