Shinella sp. HZN7: shn_28525
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Entry
shn_28525 CDS
T04278
Name
(GenBank) plasmid partitioning protein RepB
KO
K03497
ParB family transcriptional regulator, chromosome partitioning protein
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_28525
03036 Chromosome and associated proteins [BR:
shz03036
]
shn_28525
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shz04812
]
shn_28525
Transcription factors [BR:
shz03000
]
Prokaryotic type
Other transcription factors
Others
shn_28525
Chromosome and associated proteins [BR:
shz03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
shn_28525
Cytoskeleton proteins [BR:
shz04812
]
Prokaryotic cytoskeleton proteins
MinD / ParA class of bacterial cytoskeletal proteins
shn_28525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RepB
ParBc
MinC_N
Motif
Other DBs
NCBI-ProteinID:
ANH08078
LinkDB
All DBs
Position
pShin-03:281466..282440
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AA seq
324 aa
AA seq
DB search
MARKNLLEGLAALPDDNTVTASYPMRGAGKSLVRSLDELAKQADRFLEGEAVVEFDPDLI
DDSFVQDRLAQDNDDFRELVEAIRERGQDTPILVRPHATAAGRYQVVFGHRRLRAARELG
RKVKAVVKSIDDRTHVIAQGQENSARANLTFIERALFARRLEDLGYDREVISSALAANAA
AISKMMSVTERIPADIIRAIGAAPGIGRERWVELSLLAGKASNNDKVRSIVRDADFQALA
PDERFLALYAALNKSTRPVRKAEPALAKAKWEPQDKAVLAEIKNSGKIFSLSMKAKNAAR
FGDFLSRNLDALYAQFLDEENKGD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaagaatctcctcgaaggcctggctgcactgccggatgacaatacggtgacc
gcctcctatccgatgcggggcgccggaaagtcgctcgtgcgttcgctcgacgagcttgcc
aagcaggcggaccgctttctcgaaggcgaggcggtcgtcgagttcgatccggacctgatc
gacgattccttcgtgcaggatcgcctggcacaggacaatgacgatttccgcgagctcgtc
gaggcgatccgcgagcggggtcaggatacgccgatcctcgtgcggccgcatgcgacggcg
gccgggcgctaccaggtcgtcttcggccaccggcggctgcgggcagcgcgcgagctcggc
cgcaaggtcaaggcggtcgtcaagtcgatcgacgaccgcacccacgtcatcgcgcagggc
caggaaaactccgcacgcgccaacctgaccttcatcgagcgggcgctcttcgcgcggcgc
ctggaggatctggggtatgatcgggaggtcatttcctcggcgctggccgccaatgcggcg
gcgatttccaagatgatgtccgtcaccgagcgcatcccggccgacatcatccgcgcgatc
ggcgcggcgccgggcatcggccgggagcgctgggtcgagctttcgctcctggccggcaag
gcatccaacaatgacaaggtgcgcagcatcgtccgtgacgccgacttccaggcgctggcg
ccggacgagcgcttcctggcgctctatgccgcgctgaacaagagcacgcgcccggtccgg
aaggcagagcccgctttggccaaggccaagtgggagccgcaggacaaggctgtgctggcg
gagatcaagaacagcggcaagatcttttcgctgtcgatgaaggcgaagaatgccgcccgg
ttcggtgactttctttcgcgcaatctggacgcgctctacgcgcagttcctggacgaggaa
aacaagggagactga
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