Shinella sp. HZN7: shn_28795
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Entry
shn_28795 CDS
T04278
Name
(GenBank) hypothetical protein
KO
K18983
D-galactarolactone cycloisomerase [EC:
5.5.1.27
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00053
Ascorbate and aldarate metabolism
shz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
shn_28795
Enzymes [BR:
shz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.27 D-galactarolactone cycloisomerase
shn_28795
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
ANH08126
LinkDB
All DBs
Position
pShin-03:341777..342946
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AA seq
389 aa
AA seq
DB search
MSKAGPTRSPVIRSVEAHVFCVPLEKPVSTSFGTMRDRPAVLVRLEDDAGLVGWGEIWCN
WPACGAEHRARLLVSDIAPRILDRPLPDPADLWKELTAATHILVLQTGEAGPYAQVIAGF
DMAYWDLVARRRGVPLAAALSPDAAGAVRAYASGIHIRDAETVVAQSRVAGYRDFKVKVG
FDFDRDLALIRALAGSLQPGETLHADANQAFSPEAAKDFLLATADLGLGWVEEPVRVDAG
PAVWGELARLTATPLAGGENLAGLRAFRSAIGAGHLSVIQPDAAKWGGPTGCRAVAVAAI
AAGRRYCPHFLGAGIGLAASAHILAAAGGDGLLEIDVNPNPLRDAVAPAWPVVEEGVVVL
PQGPGLGTVPDLDRLEPFRTLALASGPAA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggcaggacccacccgttcccctgtgatcaggtccgtcgaggcgcatgtcttc
tgcgtgccgctcgaaaaacctgtctcgacgtccttcggcacgatgagggaccggccggcc
gtgctggtgcggctggaggatgatgcgggcctggtcggctggggggagatctggtgcaac
tggccggcgtgtggcgcggagcatcgtgcccgcctgctcgtctcggatatcgcgccgcgc
atcctcgacaggccgctgcccgatccggcggatctttggaaggaattgacagcggcaacg
cacatactcgtgctgcagaccggggaggccggcccctatgcgcaggtgatcgccggtttc
gacatggcctattgggacctcgttgcccgccgccgcggcgtgccgcttgccgcggcgctg
tcgcccgacgcggcgggcgcggtgcgcgcctatgccagcggcattcatatccgcgacgcc
gaaacggtcgtggcgcaatcccgcgtggccggctaccgcgacttcaaggtcaaggtcggt
ttcgacttcgatcgcgacctggcgctgatccgtgcgctcgccgggagcctgcagcccggg
gaaacgctgcatgcggacgccaaccaggcgttttcgccggaagcggcgaaggacttcctg
ttggcgacggccgatctcgggctcggctgggtggaggagccggtgcgtgtcgatgccggc
ccggccgtttggggcgagcttgcgcggctgaccgcaacgccgctggccggaggggagaac
cttgccggtttgcgggccttccggtcggcgatcggcgccggccacctctccgtcatccag
cctgatgcggcaaaatggggtggaccgacagggtgccgcgcggtggccgtggccgcaatc
gccgccggccggcgctactgcccgcatttcctcggcgccggcatcggccttgccgcctcg
gcccatatcctggcggctgctggcggggacggtctgctcgaaatcgacgtcaatccgaat
ccgctgcgcgatgcggtcgcgcccgcatggcccgtggtggaggagggcgtcgtcgtgctg
ccgcaagggccgggcctcggaacggtgccggatctcgaccggctcgaacccttccgcacc
ctcgccctggcgtccggccccgcggcatga
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