Shinella sp. HZN7: shn_29000 Help Entry shn_29000         CDS       T04278                                  Name (GenBank) chaperonin GroL   KO K04077   chaperonin GroEL [EC:5.6.1.7] Organism shz  Shinella sp. HZN7 Pathway shz03018   RNA degradation Brite KEGG Orthology (KO) [BR:shz00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     shn_29000  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:shz03019]     shn_29000    03110 Chaperones and folding catalysts [BR:shz03110]     shn_29000    03029 Mitochondrial biogenesis [BR:shz03029]     shn_29000   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:shz04147]     shn_29000 Enzymes [BR:shz01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.1  Enzymes altering polypeptide conformation or assembly     5.6.1.7  chaperonin ATPase      shn_29000 Messenger RNA biogenesis [BR:shz03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Chaperones      shn_29000 Chaperones and folding catalysts [BR:shz03110]  Heat shock proteins   HSP60 / Chaperonin    shn_29000 Mitochondrial biogenesis [BR:shz03029]  Mitochondrial protein import machinery   Matrix    Other matrix factors     shn_29000 Exosome [BR:shz04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    shn_29000   Exosomal proteins of other body fluids (saliva and urine)    shn_29000   Exosomal proteins of breast cancer cells    shn_29000   Exosomal proteins of colorectal cancer cells    shn_29000   Exosomal proteins of bladder cancer cells    shn_29000 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cpn60_TCP1 Motif Other DBs NCBI-ProteinID:  ANH08161 UniProt:  A0A1A9GCI0 LinkDB All DBs Position pShin-03:382392..384020 Genome browser AA seq 542 aa AA seqDB search MAAKEVRFHTDARERMLRGVDVLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEV ELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGI DLAVDAVVKELKANARKISKNAEIAQVGTISANGDAEIGRYLAEAMEKVGNEGVITVEEA KTAETELEVVEGMQFDRGYLSPYFVTNQDKMRVELEDPYILIHEKKLSNLQAMLPVLEAV VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV ISEDLGIKLENVTLNMLGRAKKVAIEKENTTIIDGVGSKTEIDGRVTQIRAQIEETTSDY DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALL RAVKALDNIQAANPDQRVGVEIVRRAIEAPVRQIAENAGAEGSVIVGKLREKADFSYGWN AQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPALPAGAGM DF NT seq 1629 nt NT seq  +upstreamnt  +downstreamnt atggctgcgaaagaagtcaggtttcacaccgatgcccgtgaacgcatgctgcgtggggtc gatgtgcttgccaacgcggtgaaggtcacgctcggccccaagggccgcaacgtcgtcatc gacaagtccttcggcgctccgcgcatcaccaaggacggtgtttccgtcgccaaggaagtc gaactggaagacaagttcgagaacatgggcgcgcagatgcttcgcgaagtggcatcgaag accaacgatctcgccggcgacggcaccacgaccgcgaccgtgcttgcccaagccatcgtc aaggaaggcgccaaggccgttgcttccggcatgaacccgatggacctgaagcgcgggatc gacctcgccgtcgacgccgtcgtcaaggaactgaaggccaacgcccgcaagatttccaag aacgccgagatcgcccaggtcggcaccatctcggccaatggcgatgccgagatcggccgc tatcttgccgaagcgatggagaaggtcggcaacgagggcgtcatcacggtcgaggaggcc aagaccgccgagaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggttacctc agcccctatttcgtcaccaaccaggacaagatgcgggtcgaactggaagatccctatatt ctcattcacgagaagaagctctcgaacctgcaggcgatgcttccggtcctcgaagccgtc gtccagtccggcaagccgcttctcatcatcgccgaagacgtcgaaggcgaagcgcttgcg acgctcgtcgtcaacaagctgcgcggcggcctgaagatcgctgccgtcaaggctcccggc ttcggcgatcgccgcaaggccatgctcgaagacatcgccatcctgacgggcggcacggtc atctccgaagacctcggcatcaagctcgagaacgtcacgctcaacatgctcggccgtgcc aagaaagtggcgatcgagaaggaaaacaccacgatcatcgatggtgtcggttccaagacc gagattgacggccgcgttacgcagatccgcgcgcagatcgaggaaaccacctccgactac gaccgcgagaagctgcaggaacggcttgccaagctcgccggcggcgttgccgtcatccgc gtcggcggctcgaccgaagtcgaggtgaaggagaagaaggaccgcgtcgacgatgcgctc catgccacccgggcggctgtcgaggaaggcatcctgccgggcggcggcgttgcgttgctg cgagccgtgaaggcgctcgacaacatccaggcggccaatccggaccagcgcgtcggcgtc gagatcgtccgccgggcgatcgaggcgccggtccgccagatcgccgagaatgccggtgcc gaaggctcggtgatcgtcggcaagctgcgtgagaaggcagacttctcctatggctggaac gcgcagaccggcgagtatggtgatctctacgcccagggcgtcatcgatccggccaaggtc gtgcgtaccgcgcttcaggatgccgcctccgtcgccggcctgctggtgacgaccgaagcg atgatcgccgagaagccgaagaaggaagccgctccggcgctgcccgctggcgccggcatg gacttctaa

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