Shinella sp. HZN7: shn_30000
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Entry
shn_30000 CDS
T04278
Name
(GenBank) mRNA 3'-end processing factor
KO
K07576
metallo-beta-lactamase family protein
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
shn_30000
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GFIT
Motif
Pfam:
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B_6
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ANH08372
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Position
pShin-04:complement(188168..189526)
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AA seq
452 aa
AA seq
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MLSLKSLGGAGTVTGSKHLLSLGEHRILIDCGLFQGLKNLRDLNWTPLPVSPHAIDAVIL
THAHLDHSGYLPRLVHAGYRGKVYATPATRDVAELILMDSGHLQEKDAEFLNRHKLSRHQ
PALPLYGVRDAQRAVEHFSTVEFGQAVRLANGATFRFRPAGHILGAASVDLEWGGRRIVF
SGDIGRYGDPLMPDPAPPPEADYILIESTYGNRIHDRTDPADALQAVIDRTVRRGGTLVV
PAFAVGRAQELLYYFWKLKRAGRLPAVPLFLDSPMAIDATGLLGRHMQDHRLDMETCKAV
FSIARYTDDVEASKAISANRFPKIVISASGMATGGRVLHHLKAFAPDARNTILLAGFQAA
GTRGRSLQEGARELKIHGSWVPVNAEVAHLDMLSAHADADELMRWLSACPRPPRKVFIVH
GEAEASEALRIRIARELGWASVVPRLDQEFVL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcactgaaatcgctcggcggcgccggaaccgtcaccggttcgaagcatctgctt
tccctcggcgagcatcgcatcctgatcgattgcggtcttttccagggcctgaagaacctg
cgtgacctcaactggacgcccctgccggtctccccgcacgccatcgatgcggtgatcctc
acccatgcgcatctcgatcatagcggatacctgccgcgtctggtgcatgcgggctatcgc
ggcaaggtctatgcaacgccggccacccgcgacgtcgccgaactgatcctcatggacagc
ggccacctgcaggaaaaggatgccgagttcctcaaccggcacaagctgtcgcgccaccag
ccggcccttccgctctatggcgtgcgggacgcgcaacgggctgtcgagcacttctcgacc
gtggagttcggacaggcggtgcggcttgccaacggcgcgaccttccgcttccgtcccgcc
gggcacattctgggcgcagcgagcgtggaccttgaatggggcggccgccggatcgtcttt
tccggcgatatcgggcgctacggcgatccgctcatgccggacccggctccgccgccggag
gccgactatatcctcatcgaatccacctacggcaatcgtatccacgacaggaccgacccg
gccgatgccctgcaggcggtcatcgaccggacggtcaggcgcggcggcacgctcgtcgtc
ccggccttcgccgtcggcagggcgcaggaactgctctactatttctggaagctgaagcgg
gcgggccgccttccggccgttccgctgttcctcgacagtccgatggccatcgacgcgacg
gggcttctgggccggcacatgcaggatcaccgtctcgatatggaaacctgcaaggccgtg
ttctccatcgcgcgctacaccgacgacgtcgaggcttcgaaggcgatcagcgccaaccgg
ttccccaagatcgtcatttcggcttcgggcatggcgacgggcgggcgcgtcctgcatcat
ctcaaggcgttcgcgcccgatgcccgcaatacgatcctgcttgccggcttccaggcggcc
ggcacgcgaggccgctcgctccaggaaggcgcgagggagctgaagatccatggctcctgg
gtgccggtcaatgcggaggtggcacatctcgacatgctctcggcccatgccgatgccgac
gaactgatgcgctggctctccgcctgcccgcgcccgccgcgcaaggtcttcatcgtgcac
ggcgaggccgaagcctccgaagcgttgcgcattcgcatcgcgcgggagcttggatgggcg
agcgtcgtgccgcggctcgatcaggaattcgtgttgtga
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