KEGG   Shinella sp. HZN7: shn_30480
Entry
shn_30480         CDS       T04278                                 
Name
(GenBank) conjugal transfer protein TrbD
  KO
K20529  type IV secretion system protein TrbD
Organism
shz  Shinella sp. HZN7
Pathway
shz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:shz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    shn_30480
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shz02044]
    shn_30480
Secretion system [BR:shz02044]
 Type IV secretion system
  Trb secretion system protein
   shn_30480
SSDB
Motif
Pfam: VirB3 Glucos_trans_II TMEM210 DUF6343 Halogen_Hydrol
Other DBs
NCBI-ProteinID: ANH08474
UniProt: A0A1A9GCA1
LinkDB
Position
pShin-05:74276..74560
AA seq 94 aa
MSLHRNRIHRALSRPNLLMGADRELVLITGLAAVILIFVVLTIYSALFGVAVWIVIVGLL
RMMAKSDPLMRQVYARHISYKPHYRPTAAPWRRY
NT seq 285 nt   +upstreamnt  +downstreamnt
gtgagcctccaccgcaatcgtatccatcgtgcgctgtcccgaccgaacctcttgatgggt
gcagaccgcgagctggtgctgatcaccggacttgcggccgtgatcctgatcttcgtggtg
ctgacgatctattcggcgctcttcggcgtggcagtatggatcgtcatcgttggtttgctt
cgcatgatggccaaatctgacccgctgatgcggcaggtctatgcccgtcacatttcctac
aagccccactaccggccaacggccgcgccgtggcgaagatactag

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