KEGG   Shinella sp. HZN7: shn_31250
Entry
shn_31250         CDS       T04278                                 
Name
(GenBank) type VI secretion protein
  KO
K03203  type IV secretion system protein VirB8
Organism
shz  Shinella sp. HZN7
Pathway
shz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    shn_31250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shz02044]
    shn_31250
Secretion system [BR:shz02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   shn_31250
SSDB
Motif
Pfam: VirB8 DUF6377
Other DBs
NCBI-ProteinID: ANH08620
UniProt: A0A1A9GDR8
LinkDB
Position
pShin-06:61981..62715
AA seq 244 aa
MSNPEQAANTPESPPIDLTAYWKAGASWEAELYRKERRSRKIAWTVATVAGISTLLSLSA
LNLLVPLKQFEAVVVIADKTTGFVEVARSLNESKLSENDAIKTANIVRYIRARETYDPRA
LKDNYDLAQLYSTGQAATDLRHEFEPSNPQSKDKVLGRNTRISVTIKSVSFLNASTATVR
FSTETRRDNTLRREHWVSVVRFRYTSAPLKNEYRFNNPLGFQVVEYRRDQESLPEVLPAD
KAAR
NT seq 735 nt   +upstreamnt  +downstreamnt
atgagcaacccagaacaagccgccaatacgcccgaatccccgccgatcgatcttaccgcc
tactggaaagccggcgcctcctgggaggcggagctttatcgcaaggagcgccgctcgcgg
aaaatcgcctggacggtcgccaccgtcgccggcatctcaacgctgctcagcctctcggcc
ctgaacctcctcgtcccgctgaagcagttcgaggccgtggtggtgatcgccgacaagacg
acgggttttgtggaggtcgcccgctcgctgaacgagagcaaactctccgagaacgacgcc
atcaagacggcgaacatcgtgcgctatatccgggcgcgcgagacctacgatcctcgggcg
ctgaaggacaattacgatctcgcccagctctattcgacaggccaggccgcgacggacctg
cgtcacgagttcgagccgtcgaatccgcaatcgaaggacaaggtgctcggtcgcaacacg
cgcatttccgtaaccatcaagtcggtgtcgttcctcaacgcctccaccgcgaccgtccgc
ttctcgacagagacacgacgcgacaacacccttcggcgcgagcactgggtctcagtggtc
cgattccggtatacgtccgcgccgctgaagaacgaatatcgcttcaacaatccgctcggc
ttccaggttgtcgaatacaggcgcgaccaggaatcgctgcccgaagtgctgccggcagac
aaggctgcgcgctga

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