Shinella sp. HZN7: shn_31415
Help
Entry
shn_31415 CDS
T04278
Name
(GenBank) hypothetical protein
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
shz
Shinella sp. HZN7
Pathway
shz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
shn_31415
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
shz01001
]
shn_31415
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shz02022
]
shn_31415
Enzymes [BR:
shz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
shn_31415
Protein kinases [BR:
shz01001
]
Histidine kinases
NtrC family
shn_31415
Two-component system [BR:
shz02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
shn_31415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HATPase_c_5
HATPase_c_2
HisKA
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ANH08652
LinkDB
All DBs
Position
pShin-06:100344..102158
Genome browser
AA seq
604 aa
AA seq
DB search
MTRTIGRMTIAMLVVTCIAPFVAYHLASGVAIGTLEGQLQRSLVLTNRAIETEIERFRYL
PMVIGEDARIRAIAGPERGEAALAAANAYLETIVRQAGPAELYVLDAHGVTLAASNHATP
ESFVGQNYSFRPYFRNALREGEGRYYAIGVTTGKPGYFLASRIDIARKPPIVVVVKADLS
PLELTWEAAGVQTAIADRWGIVFLSGNPDWKYRPLVPLGTEASARLAAERTYEGADPAAR
RPILPQGVGLPSGALQEPALRLAESGTPLLARFSPVEPDGWRVLAATGTGDTAKLAGFWA
LTALIAGLLATGTLYFLHQRAQIMRMRLRQGELLEHMVAERTQDLACEIDMRRRTEDELR
RAQEGLIHSEKMAALGRMSTAIVHEVSQPLAALDATLATAGVLVGKEAAEAAGERIVDAR
SLVKRMQRTVKHLKTFARKDASDLEEVSIDSVIRNVADLAAPRTKSLGITPVIETQAPSP
VVIAVALKLEQAILNLLLNALDAVEGRPNPAITIRRTQDADRVEVAIIDNGSGIAPEHRE
RILEPFFTTKLTGEGLGLGLSIATTIVRECGGEIRFAEVPGGGTSATVSVPLGRRGAGRL
EAAQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcaccatcggccgcatgacgatcgccatgcttgtcgtgacctgcattgccccc
ttcgtcgcctatcacctggcaagcggcgtcgccatcggcacgctcgaaggccagcttcag
cgcagcctcgtcctgaccaatcgcgccatcgaaacggagatcgagcgcttccgctacctg
ccgatggtgatcggcgaggatgcgcgtattcgcgcgatagccggaccggagcgcggcgag
gcagcccttgccgccgccaatgcctatctggagaccatcgtccggcaggccggccctgcc
gaactctacgtgctcgatgcgcatggcgtgacccttgcggcgagcaaccatgcgacgccg
gaaagcttcgtcgggcagaactacagtttccgcccctatttccgcaatgcgttgcgcgaa
ggagagggccgctactacgccatcggcgtaacgaccggcaaacctggctatttcctcgcc
tcgcgaatcgatatcgccagaaagccgcccatcgtcgttgtcgtaaaagcggacctgtcg
ccgctggagctgacctgggaggcagctggcgtgcagaccgccatcgccgaccgctggggc
atcgtcttcctctccggcaacccggactggaagtaccgtccgctggtaccgctcgggacg
gaagcctcggcgcggcttgcggcggaacgcacctacgagggcgccgaccctgcggcgcgc
aggccgatcctgccacagggggtgggcctgccctccggcgccttgcaggaaccggcgctc
cgcctcgcggagagcggcacgccgttgctcgcccgcttctcgccggtcgagccggacggc
tggcgcgtgctggcggcgaccggcaccggggatacggccaagctcgccggcttctgggcg
ctcaccgcgctaatcgccgggctccttgcgaccggcacgctgtacttcctgcatcagcgc
gcccagatcatgcgcatgcggctgcggcaaggcgaactgctcgaacacatggtggccgaa
cgcacccaggatctcgcctgcgagatcgacatgcgccgccggaccgaggacgagttgcgc
cgcgcccaggaaggcctcatccattcggaaaagatggcggcgctcggccgcatgtcgacg
gccatcgtgcatgaggtgagccagccgctcgcggcgctcgacgcgacgcttgccaccgca
ggcgtactggtgggcaaggaagccgccgaagccgcgggcgagcgcatcgtcgatgcccgc
tccctcgtcaagcgcatgcagcgcaccgtcaagcatctcaagaccttcgcgcgcaaggat
gcctcggaccttgaggaggtgtcgatcgacagcgtcatccgcaacgtggcggacctcgcc
gccccgcgcacgaaaagcctcggcatcaccccggtcatcgagacacaggcaccttcgccc
gttgtaatcgccgtcgcactgaagcttgagcaggcgattctcaatctccttttaaacgcg
ctggatgccgtcgaagggcggcccaatcccgccatcaccatccggcgcacgcaggatgcc
gatcgggtggaggtggcgatcatcgacaacggatcgggcatcgcgccggaacatcgcgag
cgcattctcgaaccttttttcaccaccaagctgacgggcgagggccttggcctcggcctg
tccatcgccacgacgatcgtacgcgaatgcggcggcgaaatccggttcgccgaagtgccg
ggcgggggaacctccgccaccgtctccgtcccgctcggcaggcgcggcgccggacgcctg
gaggcggcgcaatga
DBGET
integrated database retrieval system
