KEGG   Shinella sp. HZN7: shn_32090
Entry
shn_32090         CDS       T04278                                 
Name
(GenBank) type VI secretion protein
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
shz  Shinella sp. HZN7
Pathway
shz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    shn_32090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shz02044]
    shn_32090
Enzymes [BR:shz01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     shn_32090
Secretion system [BR:shz02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   shn_32090
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_22 T2SSE FtsK_SpoIIIE DEAD TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ANH08775
UniProt: A0A1A9GCE0
LinkDB
Position
pShin-07:92696..95107
AA seq 803 aa
MNIVNHDLKFGRERARDLGIGTHVPYLRHVDEETIVNKSGLLLQVIRLSGLPYQTMDQAE
INARLANRNMTVRSLGSSRFALYATIIRRQIKPAIDGGFDNPFADELNARYMDGLQHRTM
FVNELYLTVIRRPMTGRAGKVDRMFDVFRMADNEVEARGEALRDLKDMVSGIVGDFRSYR
PEVLSCVTRDGGLYSEPAEFFAKILAAGDERTMPLPRMSLADYVGTGRIMFGRKATEIWS
ADGATSKVAAMVSIKEYPPMTTPGQLDGLLRLPYEFVVTHSFAPEDRTTVTEAIATISRQ
ISNSDDGGTAVEDDIETARDRLASGEVVFGKHHMTVAVLERDLPRLNRAVADVTAELARM
GVVAVREDLNQEAAWWAQLPTNFSYIARQGLISSVNFAGLFSAHNFPSGQTQKVHWGLPI
SLLETTSQTAYFFNFHEADVGNFTVIGPTGSGKTVALSFLLAQGMRVNPRPRCVFIDKDR
GGEIFVRAMGGRYERLSPGEPTGFAPLQLEDTPANRSFGKTLVSYLVTPSDRVLNAEEMA
VISDAVDSIYTDFERPQRRLDMLAEALRGRMRSGIGDLADRLKEWTTGDKGWLFNNPTDR
LDFAGSVIGFDMTEILSDKRTRSAALLYMFHRIQEILDGRPSMIFLDEGWRLLDDEVFSG
FIKDWLKTIRKMNGIVGFGTQSAADVVRSDLRNTIIEQTMTNIFFPNASADEESYRKAFG
LSEKEFRFVKQADKTSRTFLIKHAQDSVIARLDLSAMPDLVKVLSGRPETVRECQTLRET
YGDEPAAWLPHFCGWTIPEAADA
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgaacatcgtcaatcacgatctgaagttcggccgcgagcgcgcccgtgatctcgggatc
ggcacccacgttccctatctccgccatgtcgacgaagaaacgatcgtcaacaagtccggc
ctgctgttgcaagtcatccggctctccggcctgccctaccagaccatggatcaggcggaa
atcaatgcccgcctcgccaaccgcaacatgacggtccgctcgctcggatcgtcacgtttc
gcgctctacgccaccatcatccgccgacagatcaagccggcaatcgacggcggtttcgac
aaccccttcgccgacgagttgaatgcccgctacatggatgggctgcagcaccggacgatg
ttcgtcaacgaactgtacctgaccgtcattcgccggccgatgaccggccgcgccggcaag
gtcgatcgcatgttcgacgtcttccgcatggcggacaacgaggtcgaagcgcgaggtgaa
gcgctacgcgacctaaaggacatggtgtccggcattgtcggcgatttccgctcctaccgc
ccggaagtcctttcctgcgtcacccgcgatggtggcctctattccgaaccggccgagttc
ttcgccaagatcctcgccgcgggcgatgagcggacgatgcccctcccccgcatgtcactg
gccgattacgtcgggaccggccggatcatgttcggccgcaaggcaacggaaatctggtcc
gccgacggcgcgacctccaaggtcgccgccatggtgtcgatcaaggaatatccgccgatg
acgacgcccggccagctcgacggactgctgcgccttccttacgagttcgtcgtcacacat
tccttcgccccggaggaccgcaccacggtcaccgaggcgatcgccacgatcagccggcag
atttcgaattccgacgatggcggcacggcggtcgaagacgatatcgaaacggcgcgcgac
cggctggcctcgggcgaagtggtgttcggcaaacatcacatgacggtggcggtgcttgag
cgcgacctgccgcggctcaaccgcgccgtcgcagacgtcacggcggagctggcgcgcatg
ggtgtggtcgccgtgcgcgaagacctcaatcaggaagcggcctggtgggcgcaactgccg
accaacttttcctacattgcccggcaggggttaatctcgtcggtcaacttcgccggcctc
ttctccgcgcacaattttccgtccgggcagacgcaaaaggtccattggggcctgccgatc
tcgctgctggagactaccagccagaccgcctatttcttcaatttccatgaggcagatgtc
ggcaacttcaccgtcatcggcccgaccggctcgggcaagacggtggcgctttccttcctt
ctcgcccagggcatgcgcgttaacccgcggccgcgctgcgtcttcatcgacaaggatcgc
ggtggcgagatcttcgtgcgcgctatgggcgggcgttatgagcgactttcgccgggcgag
ccgaccggctttgcgccgctgcagcttgaagacacgcccgccaaccgcagcttcggcaag
acgctggtctcttatcttgtcacaccgtcggaccgggtgctgaatgccgaggagatggcg
gtcatctccgatgcggtcgacagcatctacaccgatttcgaacgaccacagcggcgtctc
gacatgctggcggaagcgcttcgcggcaggatgcgatccggcattggcgatctcgccgac
cggctgaaggaatggacgacgggcgacaagggctggctgttcaacaacccgaccgacagg
ctggattttgccggctcggtgatcggcttcgacatgactgagatcctgtccgacaagcgc
acgcgctcggcggcgctcctctatatgttccatcgtattcaggagatcctcgacggccgc
ccctcgatgatcttcctcgacgaaggctggcgcctgctcgatgacgaggtcttctccggc
ttcatcaaggattggctgaagacgatccgcaagatgaacggcatagtcggcttcggcaca
cagtcggccgccgacgtggtgcgttccgacctgcgcaacacgatcatcgaacagacgatg
accaacatcttcttcccgaatgcgtcggccgacgaggagagctaccgcaaggcgttcggc
ctgtcggaaaaggaattccgcttcgtgaagcaggcagacaagacgagccgcaccttcctc
atcaagcacgcccaggactcggtgatcgcgcggctcgatctatcggcgatgcccgacctg
gtgaaggtcttgtccgggcggccggagacggtgcgcgagtgccagacgctgcgcgagacc
tatggcgacgagccggccgcgtggctccctcatttctgtggctggaccattccggaggcg
gccgatgcgtag

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