Shinella sp. HZN7: shn_32345
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Entry
shn_32345 CDS
T04278
Name
(GenBank) hypothetical protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
shz
Shinella sp. HZN7
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_32345
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
GntR family
shn_32345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
Aminotran_1_2
HTH_Crp_2
HTH_36
TrmB
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ANH08833
LinkDB
All DBs
Position
pShin-08:complement(15723..17234)
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AA seq
503 aa
AA seq
DB search
MASAKQFNYPVWTMVVREKAGGGPTLQEQLFVQLRRLIVNGQLARGARLPASRTMAADLG
VSRNTVNMVYDRLAAEGYIKRRPGSGFYVEERLPEDSVRAGADKGQSPAAVPLALSQRGR
EASVRHWSWSRQDRFDLSPGMPALDIFPYKQFGRIAAKYWRRFAASDLGYGEGGGLAALR
QQLAIYLGEARGIRCEADQIVVVGSTLQAANLVAHVLLDVGDTVGVEDPAYAMLLSTLRS
AGLKLAPIPVSGQGIGADDIARHAPEARLVLVSPVGQFPAGSTMSEPAIEGLLAWAGAAR
GWIFEDDFNSEIRWRGAPLVPLAARKGGERVIHVSSFNRVLAPGLRLAYLVVPRELVPAF
LAVQDSLSCYAPLTHQHLVADFMASGELASHIRRTRALYRDRAAAMMAALEDRVGDLFAV
PELEAGLHLTLVARQPIDDVELSRLLRGVWIDMPPLSSYCIERTDLVGLVAGFGNLSADR
VGSAVQRMERVTRRFLEKAGRTA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgccaagcagttcaactatccggtctggaccatggtggtccgcgaaaaggcg
ggcggcggcccgacgctgcaggaacagctgttcgtccagttgcgccggttgatcgtcaac
ggccagctggcgcgcggcgcccgcctgccggcaagccgcaccatggccgccgatctcggc
gtgtcgcgcaacaccgtcaacatggtctacgaccggctcgccgcggaaggctacatcaag
cgccgccccggttccggcttctacgtggaggagcggctgccggaggattccgtgcgcgcc
ggcgcggacaagggccagagccctgccgccgtgccgctggcgctgtcgcagcgcggccgg
gaggcctcggtgcgccactggagctggtcgcgccaggaccgcttcgatctcagccccggc
atgccggcgctcgatatcttcccctacaagcagttcggccggatcgccgcgaaatactgg
cgtcgattcgccgcctccgacctcggctatggtgaaggcggcggtcttgcggcgctgcgc
cagcaacttgccatctatctcggcgaggcgcgcggcatccgctgcgaggcggatcagatc
gtcgtcgtcggcagcacgttgcaggcggccaacctcgtcgcccatgtgctgctcgatgtg
ggcgataccgtcggcgtcgaggacccggcctatgcgatgctgctttccaccctgcgctcg
gccgggctgaagctcgcgccgatcccggtttccgggcaggggattggggcggacgacatt
gcgcgccatgcgccggaagcgcgcctcgtcctcgtctcgcccgtcggccagtttcctgcc
ggctccaccatgtccgagccggcgatcgagggactgctcgcctgggcgggcgccgcgcgc
ggctggatcttcgaggacgacttcaacagcgagatccgctggcggggtgcgccgcttgtg
ccgctggccgcgcgcaagggcggggaacgcgtcatccatgtcagctcgttcaaccgcgtg
ctcgcgccggggctgcggctcgcctatctcgtggtgccgcgcgagctggtgcccgcgttc
ctggcggtgcaggacagcctttcctgctacgcgccgctgacccaccagcatctcgtcgcc
gacttcatggcgagcggggagctggcttcccatatccgccgcacgcgcgccctctaccgc
gatcgcgccgccgccatgatggcggcgctggaggacagggtcggcgacctctttgccgtg
ccggaactggaggctggcctgcacctgacgctcgtcgcgcgccagcccatcgacgatgtt
gagctgtcgcggctgctgcgcggcgtgtggatcgatatgccgccgctctcgtcctattgc
atcgaaaggacggatctcgtcggcctcgtcgcgggcttcggaaacctgtcggccgaccgg
gtcggcagtgccgtgcaacggatggagcgggtgacacggcggtttctggaaaaggccggc
aggaccgcctag
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