Shinella sp. HZN7: shn_32535
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Entry
shn_32535 CDS
T04278
Name
(GenBank) dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_32535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_32535
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
shn_32535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_16
AAA_5
AAA_29
AAA_13
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ANH08867
UniProt:
A0A1A9GCL8
LinkDB
All DBs
Position
pShin-08:59566..60600
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AA seq
344 aa
AA seq
DB search
MTGPEPILSVRDLSKRFSVTGGLIFEREIAEVNAVTGVSFDVKPGETLGLVGESGCGKST
LGRCILRLIEPSSGQTLFRGRDINAASPAEMRALRRKIQLVFQDPYASLHPRMRVAENIA
EPLRISDLSHVQRKERVAEMLDLVRLNPEHGQRYPHELSGGQRQRVVIARALALKPELLV
LDEPVSALDVSVQAGVLNLLKDIQRDFGTAYVFIAHDLSVVQHISHRVAVMYLGKIVEIA
EKHRLYRAPMHPYTQALMSAVPLADPALERSRSRIVLKGDLPSPLNPPSGCRFRTRCPIA
QKLCAEVEPPLNEREEGHSVACHFPNAMETGLSARQKSGPGGME
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggccggaacccatcctctccgtcagggacctctcgaagcgtttctccgtcacc
ggcggcctgatcttcgagcgcgagattgccgaggtcaacgcggtgaccggcgtgtccttc
gacgtcaagcccggcgaaacgctggggctggtcggcgaatccggctgcggcaagtccacc
ctcggccgctgcatcctgcggctgatcgagccctccagcgggcagaccctgttccgcggc
cgcgatatcaacgcggcgagccccgcggagatgcgtgccctgcgccgcaagatccagctg
gtcttccaggatccctatgcatcgctgcatccgcgcatgcgggtggccgagaacatcgcc
gagccgttgcgcatcagcgacctttcgcatgttcagcgcaaggaacgggtcgccgagatg
ctcgatctcgtccgcctcaacccggagcacggccagcgctatccgcacgaactgtccggc
ggccagcgccagcgcgtggtgatcgcccgggccctcgcactgaagccggagctgctcgtg
ctcgacgagccggtctccgcgctcgacgtctccgtgcaggcgggcgtgctcaacctcctc
aaggatattcagcgggatttcggcaccgcctatgtcttcatcgcgcatgacctgtccgtc
gtgcagcacatctcgcaccgggtggccgtcatgtatctcggcaagatcgtcgagatcgcc
gaaaagcaccggctctaccgggcaccgatgcatccctatacccaggccctgatgtccgcc
gtgccgctggccgatcccgcgctcgagcgcagccgctcgcgcatcgtgctgaagggcgac
ctgccgagcccgctcaatccgccgtccgggtgtcgcttccgcacgcgctgccccatcgcc
cagaagctctgcgcggaggtggagccgccgctgaacgaacgagaggaaggccattcggtc
gcctgccactttccgaatgccatggagaccggtttgtcggcccgtcagaagagcgggcct
ggaggaatggaatga
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