Shinella sp. HZN7: shn_33445
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Entry
shn_33445 CDS
T04278
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
shz
Shinella sp. HZN7
Pathway
shz02010
ABC transporters
shz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
shn_33445
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
shn_33445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_33445
Transporters [BR:
shz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
shn_33445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NAD_binding_3
PELOTA_1
Motif
Other DBs
NCBI-ProteinID:
ANH09029
LinkDB
All DBs
Position
pShin-09:125184..126200
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AA seq
338 aa
AA seq
DB search
MNKLAKTAFGLAMATLIGAGSAAVAQTSMGDPLRETYYSNVKDRKVVFVPVFMGLDLTEG
WSKIMARQAKELGYNYEVRNSNFNTAAGAQTITSLISEEPDVIVVQNPDVQSYAKLLQQA
EKAGIRVIQLNMKTNYQTTGFVGADVELIGEKQAEAAVAKCGAGDQPGKVLVLAGPPTSP
FSAYMLKGYENVLNGNDKIQIVSVQSTGDYESSKAKSITQVVLQQHPDLCAILGVWDNAD
VGTAAALQEAGKKPGDILVTTSGGGGELACKGLREGLWQYYVSYDVPGQGRDLNALILAA
LQDKNEVGSTKTVIYTPLVTYTPETLGDERCWSLDTLR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcttgccaaaactgcctttggcctcgccatggcgaccctgatcggggcggga
tcggctgccgtcgcgcagaccagcatgggcgatcccctgcgcgaaacctactactcgaat
gtcaaggaccgcaaggtggtcttcgtgccggtcttcatggggctcgacctgaccgaaggc
tggtcgaagatcatggcccgccaggccaaggagctcggctacaactatgaagtccgcaac
tcgaacttcaacactgccgccggcgcacagacgatcacctcgctcatcagcgaggagccc
gacgtcatcgtcgtgcagaaccccgatgtccagtcctacgccaagctgcttcagcaggct
gagaaggccggcatccgcgtgatccagctgaacatgaagaccaactaccagacgaccggc
ttcgtcggcgctgacgtggagctgattggcgagaagcaggccgaagcggctgtcgccaag
tgcggtgccggcgatcagcccggcaaggttcttgttctggccggcccgccgaccagccct
ttctccgcctacatgctgaagggctacgagaacgtcctcaacggcaatgacaagatccag
atcgtttcggtccagtcgaccggcgattatgaatcctccaaggccaagtcgattacccag
gtggtgctgcagcagcatccggatctctgcgccatcctcggcgtatgggacaatgccgac
gtaggcacggccgccgcgctgcaggaagcgggcaagaagccgggcgacatcctcgtgaca
acctccggcggcggcggcgaactcgcctgcaagggcctgcgtgaaggcctctggcagtac
tatgtcagctacgacgtgccggggcagggccgcgatctgaacgccctgatcctcgcagca
ctccaggacaagaacgaggtcggctcgaccaagaccgtcatctacacgccgctcgtgacc
tacacgcccgagacgctcggcgacgagcgctgctggtcgctggataccctgcgttaa
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integrated database retrieval system
