Shinella sp. HZN7: shn_33600
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Entry
shn_33600 CDS
T04278
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
shz
Shinella sp. HZN7
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Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
Bep_C_terminal
AAA_19
Viral_helicase1
AAA_11
UvrD_C_2
AAA_22
Herpes_Helicase
PIF1
AAA_16
ATP_bind_1
ABC_tran
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ANH09058
UniProt:
A0A1A9GEW8
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Position
pShin-10:24627..28208
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AA seq
1193 aa
AA seq
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MAVPHFSVSVVARGSGRSAVLSAAYRHCVKMEFEREARTIDYTRKQGLLHEEFVIPEDAP
DWLRSMIADRSVAAASEAFWNAVEGFEKRSDAQLAKDVTMALPIELSADQNIALVREFVA
SHITAKGMVADWVYHDAPGNPHVHLMTTLRPLTDDGFGAKKVAVLGADGKSLRNDSGKIV
YELWAGGVGDFNAFRDGWFVCQNRHLALAGLDIRVDGRSYEKQGIALEPTIHLGVGANAI
KQKSAEASEPITLERIELQEERRAENARRIEDRPAVVIDMIAREKSVFDERDVAKILHRY
VDDAGLFQSLMARVLQSPDVVRLEREHVDFASGARVPAKLTTRDLIRTEAEMASRAVFLA
GRSSHRVENAILQETFARYSRLSKEQKTAIAHVAGSHRIAAVVGRAGAGKTTMMKAAREA
WEAAGYRVVGGALAGKAAEGLETEAGIVSRTLSSWELRWNDGRSQLDDKTVFVLDEAGMV
SSRQLALFVEAVTKAGAKLVLVGDPDQLQPIEAGAAFRAIADRIGYAELETIYRQREQWM
RDASLDLARGNVAAALSAYDAADLVQTGWTRQDAIEGLIDNWNYDFDPTKTTLILAHRRR
DVRELNELARAKLVERGIVGEGSVFRTEDGARRFAAGDQIVFLKNEGSLGVKNGMLAKVV
EAAPGRIVAEIGEGDSRRQVTVEQRFYSNVDHGYATTIHKSQGATVDRVKVLASNTLDRH
LTYVAMTRHREAAELYVGMEEFTNRRGGVLVDHGEAPYEHKPGNRDSYFVTLTYGDGQER
TIWGVDLARAIDEADAHVGDRIGLRHEGSESVRLPDGTMAKRNTWKIVPVKELAMERLKE
RLSRDASKETTLDYEGASSYRAALRFAEARGMHLMNVARTISRDRLAWTVRQKQKLVDLA
ARLKAVGAALGLARGSDKQSVPTIVKEARPMVAGITTFAKSLEQSVEDKLSNDPALKQQW
KDVSTRFQMVYAQPEAAFAAINVDAMIKDQARATATIAKISAEPETFGTLKGKTGMFASR
ADKQERDTALVNAPALARNLERYLRGRAEAERKHETEERAARIKVSVDIPALSPNAKQTL
ERIRDAIDRNDLPAGLEYALADKMVKAELEGFAKAVTERFGERTFLGVSAKEAGGEAFKT
VTRGMTDPQKAEVQTAWNSMRAVQQLAAHERVVVGIKQAEALRQTQAKGLSLK
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtccctcatttctccgtcagcgtcgtcgcccgcggctccggccgcagcgccgtg
ctgtcggcggcctaccggcactgcgtgaaaatggagttcgagcgcgaggcgcggaccatc
gactacacccgtaagcagggcctccttcatgaggaattcgttattccggaggacgctccg
gactggctgcggtcgatgatcgccgatcgctcggtcgcggccgcgtcggaggctttctgg
aacgctgtcgagggtttcgagaagcgctcggatgcgcagctcgccaaggatgtcaccatg
gccctgccgatcgagctgtcggcggatcagaacattgctctcgttcgcgagttcgtggcg
agccatatcaccgccaagggaatggtcgcagactgggtctatcacgatgcgccgggcaac
ccgcatgtgcatctcatgactaccttgcgtccgctgaccgacgacggtttcggcgcgaag
aaggtcgcggtgctcggtgcagacggcaagtcgctgcgcaacgattccggcaagatcgtc
tatgagctatgggcgggaggcgtcggggatttcaacgccttccgcgacggctggttcgtc
tgtcagaaccggcatctggcactcgccggtctcgacatccgcgtcgatggccgctcctat
gagaagcagggcatcgcccttgagccgaccatccatctcggcgtcggcgcgaacgccatc
aagcagaagtcggccgaggcgtccgagccgatcacgctggaacgcatcgagctgcaggag
gaacggcgagccgagaacgcgcgccgcatcgaggaccgccccgccgtcgtcatcgatatg
atcgcgcgggagaagagcgtcttcgacgagcgcgacgtcgcgaagatcttgcatcgctat
gtcgatgacgctggtctcttccagtcgttgatggcgcgtgttttgcaaagccctgacgtt
gttcggctggagcgtgagcatgtggacttcgccagtggcgcgcgggtgccggcgaaactg
actacccgcgacctgatccgcaccgaggcggagatggccagcagggcggtcttccttgcc
ggccgttcctcacaccgcgtcgaaaacgcaatcctgcaggagacgttcgcgcggtattcc
cgcctgtcgaaggagcagaagacggcgatcgcccatgtcgccggcagccatcggatcgct
gcggtcgtcggtcgcgccggcgccggcaagaccacgatgatgaaggcggcgcgcgaagcc
tgggaggcggccggctatcgtgtcgtcggcggtgcgttggcgggcaaggcggccgagggc
ttggagaccgaagccgggatcgtctcgcgcacgctttcgtcgtgggagcttcgctggaac
gacgggcggagccagcttgacgacaagacggtcttcgtcttggacgaggcaggcatggtg
tcttctcgccagcttgcactcttcgtcgaggccgtcacgaaggcgggcgcgaaactcgtg
cttgtcggcgatccggatcagctccagccgatcgaggcgggtgccgcgtttcgcgctatt
gccgatcgcatcggatacgccgaactggagaccatctaccgccagcgtgagcaatggatg
cgcgatgcgtcgctggatcttgcgcgcggcaacgtggcggccgcgctgagcgcctatgac
gcggctgacctggtgcaaaccggctggacgcggcaggacgcgatcgagggactgatcgac
aactggaactacgatttcgatccgacgaagaccacgctcatcctcgcccaccgccgccgc
gatgtccgcgaactgaacgagctggcccgcgccaagcttgtcgagcgcggtattgtcggc
gagggctctgtgttccggaccgaggacggtgctcgtcgtttcgccgccggcgaccagatc
gtcttcctgaagaacgagggcagccttggcgtcaagaacgggatgctggccaaggtcgtt
gaagctgcgccaggccgtatcgtcgcagagattggcgagggagacagccgcaggcaggtc
accgtcgaacagcgcttctacagtaacgtcgatcacggctatgccaccacgatccacaag
tcccagggcgccactgtcgatcgcgtcaaagttctcgcctccaacacgcttgatcgtcat
ctgacctatgtcgcgatgacgcgccaccgcgaggcggccgaactctacgtcggcatggaa
gagttcaccaaccggcgtggtggtgttctcgtcgatcacggtgaggcgccctacgaacac
aagcccggaaaccgcgacagctacttcgtcacgctcacctatggtgacggacaggagcgc
acgatctggggcgtcgatctcgcccgcgcgattgatgaagcggatgcacatgtcggcgac
cggatcggtcttcgccacgagggctcggagtcggtgagactgcccgatggcacgatggcc
aagcgcaacacgtggaagatcgtgccggtcaaggaactggcgatggagcggctgaaggaa
cgcctttcccgcgatgcgtccaaggaaacgacactcgactatgagggtgcatcctcctat
cgcgccgccctccgtttcgccgaagcgcgcggcatgcacctcatgaatgtcgctcggacc
atttcccgcgaccggctcgcctggaccgttcggcaaaagcagaagctcgtcgatctcgcc
gcaaggctgaaagctgtcggcgcggcactcggccttgcccgcggcagcgacaaacaatcc
gttccgaccatcgtcaaggaggcaagacccatggttgccggcattaccacattcgccaaa
tcgctcgagcagagcgtcgaggacaaactctccaacgatccggcgctgaagcagcagtgg
aaagatgtctccacgcgtttccaaatggtctatgcgcagccggaggcggcattcgcggcg
atcaatgttgatgcgatgataaaggatcaggcgcgcgccaccgcgacgatagcgaagatc
tcggccgagccggagaccttcggcacgctcaagggcaagacgggcatgttcgccagccgc
gccgacaagcaggagcgcgataccgccctcgtcaacgcgcctgcgctcgcccgcaatctg
gaacgatatctgcgcggtcgggccgaggccgagcgcaagcatgagaccgaggagcgcgct
gcgcgcatcaaggtctcggtcgatatcccggcgctgtcgcccaatgcgaagcagacgctc
gagcggatacgcgacgccatcgaccggaacgatcttccggccggtctcgaatatgcgctt
gccgacaagatggtgaaggcggaattggaaggtttcgccaaggcggtgacagagcggttc
ggcgagcgaacctttctcggcgtgtcggcgaaggaggccggcggcgaggcgttcaaaacg
gtcacgcgcggcatgaccgatccgcagaaggcggaggtgcaaacggcgtggaattcaatg
cgggcggtgcagcagctcgctgcgcatgaacgcgtggtcgtcggcatcaagcaggcagag
gcgttgcgccagacccaggcgaaaggcctgtcgctcaaatga
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