KEGG   Shinella sp. HZN7: shn_34485
Entry
shn_34485         CDS       T04278                                 
Name
(GenBank) conjugal transfer protein TrbD
  KO
K20529  type IV secretion system protein TrbD
Organism
shz  Shinella sp. HZN7
Pathway
shz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:shz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    shn_34485
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shz02044]
    shn_34485
Secretion system [BR:shz02044]
 Type IV secretion system
  Trb secretion system protein
   shn_34485
SSDB
Motif
Pfam: VirB3
Other DBs
NCBI-ProteinID: ANH09226
LinkDB
Position
pShin-12:3632..3931
AA seq 99 aa
MAEPGSNLSRSPVHRALSRPNLLMGADRELVLLTALAAIILIFVVLTWYAALFGLAIWLI
ALAALRMMAKADPLMRRVYVRHISYKAFYRATSSPWRKF
NT seq 300 nt   +upstreamnt  +downstreamnt
atggctgagcccggctccaacctttcccgctcgcctgtacacagggcgctatcgcgtccg
aacctgctgatgggcgccgaccgcgagctggtgctgctgacggcacttgccgccatcatc
ctgatcttcgttgtgctgacctggtacgcagcgctcttcggcctcgcgatctggctgatc
gctctcgcggcactgcgcatgatggcaaaggccgatcctttgatgcggcgggtctatgtc
cgccatatctcctacaaggcgttctatcgagcaacgtcctcgccctggcgcaagttctga

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