Saccharolobus islandicus M.14.25: M1425_1808
Help
Entry
M1425_1808 CDS
T00890
Name
(GenBank) RNA binding S1 domain protein
KO
K07573
exosome complex component CSL4
Organism
sia
Saccharolobus islandicus M.14.25
Pathway
sia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M1425_1808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sia03019
]
M1425_1808
Messenger RNA biogenesis [BR:
sia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
M1425_1808
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
M1425_1808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
S1
Zn_ribbon_Com
OB_RRP5_4th
DUF5817
FtrD-like
Cas12f1-like_TNB
HypA
C1_1
Motif
Other DBs
NCBI-ProteinID:
ACP38553
UniProt:
C3MXL9
LinkDB
All DBs
Position
1675909..1676478
Genome browser
AA seq
189 aa
AA seq
DB search
MRVQGELTLPGEELAVIEEFIAGDGTYEQNGIVRAAVVGKIFYDMLNRKSNVLGFKKIIL
QHLKKAKYVIGIVNSIKEDSALVSIVGIEEKSLASSISAYLHISQISNKKLNSITDAIKI
GDVIKAKLLSYTFPLALTIKMKDLGVVYARCSRCGYLLIKQDENNLKCQRCGNIEQRKIG
SYMVKKGGN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcaaggtgaattaaccttacccggagaagagctagcagtgattgaagaattt
atagctggcgatggtacgtatgaacaaaatggtatagttagagctgcggttgtaggaaaa
atcttttatgatatgctaaatagaaaaagtaacgtactgggatttaagaaaatcatactt
caacacttaaagaaggctaaatacgtgatcggtattgtaaattctattaaagaagattca
gcactagtttcaatagtaggtatcgaggagaaaagtcttgcgtcatcaatttcggcttac
ttacatatctctcaaataagtaataaaaaacttaatagtataacagatgctataaaaatc
ggagatgtaattaaagctaaattactttcatacacttttcctttagctttaactattaag
atgaaagatcttggagttgtttatgctagatgctcaagatgtggatacttattgatcaag
caagacgaaaataatttaaaatgtcagagatgcggaaatattgaacaacgaaaaatagga
tcttatatggtgaagaaaggtggaaattaa
DBGET
integrated database retrieval system
