Saccharolobus islandicus M.14.25: M1425_1864
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Entry
M1425_1864 CDS
T00890
Name
(GenBank) Transcription factor TFIIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
sia
Saccharolobus islandicus M.14.25
Pathway
sia03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sia00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M1425_1864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sia03021
]
M1425_1864
Transcription machinery [BR:
sia03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
M1425_1864
Prokaryotic type
Archaeal type
TFE
M1425_1864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_20
TrmB
HTH_9
HTH_IclR
Sigma70_r3
Fe_dep_repress
GntR
HTH_12
HTH_24
HTH_36
HTH_Crp_2
DnaD_N
Rrf2
HTH_5
DUF4423
HTH_11
LexA_DNA_bind
Zn_Ribbon_TF
HTH_DeoR
MarR
MarR_2
RPA_C
DUF7342
CdaS_N
Zn_ribbon_10
TSKS
WHD_MCM8
Mut7-C
Motif
Other DBs
NCBI-ProteinID:
ACP38608
UniProt:
C3MY51
LinkDB
All DBs
Position
1711583..1712119
Genome browser
AA seq
178 aa
AA seq
DB search
MVNAEDLFINLAKSLLGDDVIDVLRVLLEKGTEMTDEEIANQLNIKVNDVRKKLNLLEEQ
GFVSYRKTRDKDSGWFIYYWKPNIDQINEILLNRKRLILDKLKSRLEYEKNNTFFICPQD
NSRYSFEEAFENEFKCLKCGSQLTYYDTEKIKSFLEQKIRQIEEEIDKETKLGANKSH
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggttaacgcagaggacttgtttattaatctagcgaaaagtttgttgggagatgacgtg
attgatgttttgcgagtgctactagaaaaagggactgaaatgacagatgaagaaatagcg
aatcagcttaatataaaggttaatgatgtgagaaagaaattgaatttgctggaggagcaa
ggttttgtaagttataggaaaacaagggataaagatagcggatggttcatttattattgg
aagcctaacatagatcaaattaatgagatactattaaatagaaaaaggttaatattggat
aaattaaaatcaagattagaatatgagaaaaataatacattcttcatatgtccacaagat
aatagtagatattcatttgaggaagcgtttgaaaatgaatttaaatgtttgaaatgtgga
tctcaactaacctactatgatacggaaaagattaagtcattcttggagcaaaaaataaga
caaatagaggaagagatagataaggagacaaaacttggggcaaataaaagtcattga
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