KEGG   Saccharolobus islandicus M.14.25: M1425_1957
Entry
M1425_1957        CDS       T00890                                 
Name
(GenBank) XPG I domain protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
sia  Saccharolobus islandicus M.14.25
Pathway
sia03030  DNA replication
sia03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M1425_1957
   03410 Base excision repair
    M1425_1957
   03450 Non-homologous end-joining
    M1425_1957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sia03032]
    M1425_1957
   03400 DNA repair and recombination proteins [BR:sia03400]
    M1425_1957
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sia04147]
    M1425_1957
DNA replication proteins [BR:sia03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    M1425_1957
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     M1425_1957
DNA repair and recombination proteins [BR:sia03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     M1425_1957
Exosome [BR:sia04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   M1425_1957
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc Ribosomal_S13 DUF2458 HHH_5 PIN_2
Other DBs
NCBI-ProteinID: ACP38701
UniProt: C3MYE4
LinkDB
Position
complement(1797100..1798008)
AA seq 302 aa
MDSHGRITSHLSGLFYRTINILEEGVIPIYVFDGKPPEQKSEELERRRKIKEEAERKLER
AKSEGKIEELRKYSQAILRLSNMMVEESKNLLRAMGIPIVQAPSEGEAEAAYLNILGFSW
AAASQDYDSILFGAKRLVRNLTITGKRKLPNKDVYIDIKPELIETELLLKKLGITREQLI
DISILIGTDYNPDGIKGIGPERALKIIKKYGKIEKAIEYGEISKRDITFNIDEIRSLFLK
PQVVKPEETLDLNEPNDKDIVNILVNEHNFSEERVKNGIERLIKAIREAKGASRQTGLDR
WF
NT seq 909 nt   +upstreamnt  +downstreamnt
atggattcccatggaaggataaccagccacctaagtggattattttatagaacgataaat
atcctagaagagggtgttataccgatctacgtctttgacggcaaaccaccagagcaaaaa
agtgaagagttagaaagaaggagaaaaataaaagaagaagctgagagaaagctagagaga
gctaagagtgaagggaaaatagaagagctaaggaaatattcgcaagctatacttagacta
tccaatatgatggtagaggaaagtaaaaacttgttgagagctatgggaatacctatagtt
caagcaccttctgaaggagaagctgaggctgcatatttaaatatattaggatttagctgg
gcagcggcgagtcaagattacgactcgattctttttggagctaagagattagtaagaaat
ttgacaatcactggtaaaagaaaacttcctaacaaggacgtatatatagatataaaacca
gaattaatagaaactgaattattacttaagaaattaggaataacaagagaacaattaatt
gatataagtatattaattgggactgattataatcctgatggaattaagggaatagggcca
gaaagagcactaaagataattaaaaaatacggcaagatagagaaggcaatagaatatgga
gaaatttcaaaaagagatattactttcaatattgatgagataagaagtttatttttgaaa
ccacaagtagtgaaaccagaagaaaccttggatttaaatgaacccaatgataaggatata
gttaacatattagtaaatgaacataacttcagtgaggaaagagttaagaatggaattgaa
agattaattaaagcaataagagaagctaaaggagcttctagacaaaccggattagatagg
tggttttag

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