Streptococcus intermedius B196: SIR_0414
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Entry
SIR_0414 CDS
T02830
Name
(GenBank) putative farnesyl diphosphate synthase/geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sib
Streptococcus intermedius B196
Pathway
sib00900
Terpenoid backbone biosynthesis
sib01100
Metabolic pathways
sib01110
Biosynthesis of secondary metabolites
Module
sib_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SIR_0414
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sib01006
]
SIR_0414
Enzymes [BR:
sib01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SIR_0414
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SIR_0414
2.5.1.29 geranylgeranyl diphosphate synthase
SIR_0414
Prenyltransferases [BR:
sib01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SIR_0414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AGU75788
UniProt:
T1ZCY8
LinkDB
All DBs
Position
394048..394950
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AA seq
300 aa
AA seq
DB search
MKQDEKLVRIGRTIENFYVQKMVSADLIEAILYSINAGGKRIRPLLLLELLEGMGLELTE
AHFQVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTSHKKFGEDMAILAGDSLFLDSYAL
VAEAALPSQIRANLIAELSQAAGTFGMVGGQVLDMQGEGRDVSLEELQVIHANKTGKLLT
YPFIAAGLIAELAEPQQEKLRKTGQLLGLAFQVRDDILDETASFEDLGKTPQKDVAAGKA
TYPAILGLDGAKHFFEEQLSAAEILLAEVEMDIDFSGYAIRKIIESLRLNDEGKSRCSSL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagacgaaaaattggttagaattggacggactattgagaatttttatgttcaa
aagatggtatcggctgatttgattgaagcgattctttactcgatcaatgcaggtggcaag
cggattcgccctctgctgcttttggaattgttagaaggtatgggtttggaattgacagag
gcccattttcaggtggccgcagcgcttgagatgattcatactggaagtttgattcatgac
gatttaccagctatggatgatgatgattatcgtcgtggccgtttaaccagccacaaaaaa
tttggagaggatatggctattttagctggggattcgctctttttggattcttatgcctta
gtagcagaagcggcattacctagtcagattagggcaaacttaattgcagaattatctcaa
gctgctggaacctttggcatggttggaggtcaagttcttgatatgcaaggagaaggtcgt
gacgttagtttggaagagttacaggttattcatgctaacaaaactggtaagctcctgacc
tatccttttattgcagctggtttgattgctgaactagcagaaccgcagcaagaaaaatta
agaaaaacgggtcaattacttggactagcttttcaggtgcgagatgatattctagatgag
acagctagctttgaggacttggggaagacaccacaaaaagatgtagcagcagggaaggcc
acttatccagctatcttgggcttggatggtgctaagcatttctttgaagaacagttgagc
gcagctgagattttattagcagaagtagaaatggacatagatttttcagggtatgctatc
agaaaaataatagaaagtttgaggctgaatgacgaaggaaagagtagatgttctagctta
taa
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