Streptococcus intermedius B196: SIR_0417
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Entry
SIR_0417 CDS
T02830
Symbol
recN
Name
(GenBank) putative DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
sib
Streptococcus intermedius B196
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sib03400
]
SIR_0417 (recN)
DNA repair and recombination proteins [BR:
sib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SIR_0417 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
SIR_0417 (recN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_15
AAA_22
AAA_21
RsgA_GTPase
NTPase_P4
DUF5798
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AGU75791
UniProt:
T1ZDJ4
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All DBs
Position
396163..397821
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AA seq
552 aa
AA seq
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MLLEISIKNFAIIEEVSLNFEQGMTVLTGETGAGKSIIIDAMNMMLGSRATTDVIRHGAP
KAEIEGLFAIEQSKALVEIFEQQGLDMTDELIIRREIFQNGRSISRINGQMVNLSVLRSV
GQHLVDIHGQHDQEELMRSQLHIAMLDEFGDEVFFKLKADYQQTFDQYRQLRKQVITIQK
NQEENKARIDMLEYQIAEIEAANLRAGEDLALNQERDKLLNHKQIADTLTNAYAMLDNED
FSSLSNIRAAMNDMEAIEEYDVTYKEIAANLSESYYVLEDATKRLEDILDDMDFDGDRLL
EVERRLDLIYSITRKYGGHVDDVLAYLEQISKEYALLTGKNLSSNDLDQELRKLEKDLVS
LAGRLSQGRHELAQQLEAEIQQELKDLYMEKANFRVQFTKGKFSREGNEHVEFYISTNPG
EDYKPLVKIASGGELSRLMLAIKSAFSRKEGKTSIVFDEVDTGVSGRVAQAIAQKIHKIG
SNGQVLAISHLPQVIAIADYQFFIEKISDEYSTVSTVRLLSDEERIEEIAKMLAGENVTE
AALTQARELLKQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaaatttccattaaaaattttgcaattattgaagaggtttctctcaatttt
gagcaaggcatgaccgttttgacaggtgaaacgggtgctgggaagtctattatcattgat
gctatgaatatgatgttgggaagccgagcaacaacagatgtgattcgtcatggcgctccg
aaagctgagattgaaggactgtttgcgattgaacagagtaaagctttggttgaaatcttt
gagcagcaagggcttgatatgacagatgagttgattattcggcgagaaattttccaaaac
ggtcgcagtatcagccgtattaatggtcaaatggtcaatttatccgttttgcgatcggtt
ggacagcatttggtggatattcatggtcagcacgaccaagaagagttgatgcgttcccag
ttacatattgctatgttggacgagtttggagatgaagtattttttaaactcaaagcggat
tatcagcaaacttttgatcagtatcgtcagttgcgtaagcaagttataacgattcagaag
aatcaagaagaaaataaggcgcggattgatatgctggaatatcagattgcagagattgag
gcggctaatttaagagctggcgaagatttggcattaaaccaagaacgcgataaattactc
aaccataagcagattgcagacactttgacaaatgcctacgctatgctggataatgaggat
ttttcgagtttatctaatattcgagctgccatgaatgatatggaagctatcgaagagtac
gatgttacttacaaagaaattgcggctaatctttctgagtcttactatgtactggaagac
gcaacaaagcgtttggaagacattctagatgacatggattttgatggtgatcgtctctta
gaagttgaaaggcgtctagatctgatttatagcattactcgtaaatacggtgggcatgtg
gatgatgtgttagcttatttagagcaaatttctaaagaatatgcgcttctgactggaaag
aatctctcatcaaatgatttggatcaagagttgagaaagctagagaaagatttggtctct
ctagcaggtcgtctgagtcagggacggcacgaattagcccagcaattagaagcagagatt
cagcaagaattaaaagatctctatatggaaaaggcgaattttcgagttcaatttaccaaa
ggaaagtttagccgcgagggaaatgagcatgttgaattttacatttcgactaatccgggc
gaagattacaaaccgctcgttaagattgcctccggtggtgaattgtcacgtttgatgttg
gcaatcaagtctgctttttctcgtaaagaaggcaagacaagcattgtttttgatgaggta
gacacaggcgtatctggacgtgttgcgcaagctattgctcagaaaattcataaaattggc
tccaatggacaagttcttgccatctcgcacctgccacaagtgattgctattgcagactat
caatttttcatcgagaaaatatcagatgaatattcaaccgtttcaacagttcgcttgttg
tctgatgaagagcgtatcgaagagattgctaaaatgttagcgggtgaaaatgtgactgaa
gcagctctcactcaggctagagaactattgaaacagtaa
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