Streptococcus intermedius B196: SIR_0542
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Entry
SIR_0542 CDS
T02830
Name
(GenBank) putative ABC transporter, ATP-binding protein
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
sib
Streptococcus intermedius B196
Pathway
sib02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SIR_0542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sib02000
]
SIR_0542
Transporters [BR:
sib02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SIR_0542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA
RsgA_GTPase
AAA_5
AAA_29
AAA_21
AAA_22
AAA_16
AAA_15
AAA_25
Cytidylate_kin
AAA_18
AAA_23
AAA_30
AAA_33
ThiC-associated
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGU75914
UniProt:
T1ZCD3
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All DBs
Position
544683..546449
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AA seq
588 aa
AA seq
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MKKKSVLAWIWDFVSLHKLYFVLSLIFAFASVISGFLPYFFIGGMINQLLTGNKNWDFYL
QQSAWVGLAWIGYWGFHGISTMLSHTATFKILAEMRRRLTDKLARLPLGTVLSQSSGSYK
NIIVERVDATETTLAHLIPEFTAGIFGPIIVLIAMLVIDWRLTLLSLLTIPIVALAYMRM
VANSEADYQNTLVKTKKLNDTAVEYINGIEVIKVFGKEKFSYDKFVTAAREGADCFIEWM
RKFNLEMGIVTAFLPSGLLFLLPAGCYFYLQGSLTASNFILMIILSLSLLTPLILVASYM
DDLRKIGTIFGQVIDILEKPDLKRPQELIELPKGRDLVMTDVSFGYTDEEEVLHDISLDI
KAGSINALVGPSGSGKSTIAKLLASFWDVTSGQITYGGLDICRLPLDYYSQQIAYVTQDN
YLFDETIMENIRMGNPAASDEEVIEIARRCGCYDFIMNLEAGFETQVGSGGGHLSGGERQ
RIAIARAMLKDAPILILDEATAYTDPENEARIQSSLARLIEGRTLIVIAHRLSTIMSADQ
IVLVNDGRIEARGRHEELLVTSPLYAFMWQAHIATRDNSEMEGGLTHA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaatctgtccttgcttggatctgggactttgtctcccttcataagctatat
tttgtactcagtctgatttttgcctttgcctctgtgatttcaggttttctgccttatttc
tttattggtggaatgattaatcagctcttgactggcaataaaaactgggatttctacctg
cagcagtctgcttgggtgggtctggcttggattggttactggggattccacggtatttcc
accatgctgtcgcatacggctacttttaagattttagcggaaatgcggcgccgcctgaca
gacaagctggctaggctgcctcttggtacagtgctcagtcagtcatcggggagttataag
aacattatcgttgagcgggtggatgcgaccgaaacgaccttggctcacctgattccagag
tttaccgctgggatttttggtccgattattgttctcattgccatgctggtcatcgattgg
cggctgaccttactgtccctcctaactattcccattgtggcattggcctatatgcggatg
gttgccaatagcgaagcagactaccaaaatactctggtcaagaccaaaaagctcaatgat
acggcggtggaatatatcaatgggattgaagttatcaaggtttttggcaaggaaaagttc
tcttacgataagtttgtgacggctgctagagaaggagcagactgctttattgagtggatg
cgcaagtttaatctagagatgggcattgtgactgcttttctgccatcaggcttgctcttt
ctgctgccggctggctgttatttctatctgcaaggtagcttgactgccagcaatttcatt
ctaatgatcattctgtcgctcagtcttctgactcctctgattttagtggctagttacatg
gacgatttacggaaaatcgggactatttttggtcaagtgatcgatattttggaaaagcct
gatttgaaaagacctcaggagctgatagaacttccaaaaggaagggatctggtcatgaca
gatgtcagctttggctatacagatgaagaggaagtactgcatgacatttcgctagatatt
aaggctggcagcatcaatgctttagttgggccatcaggctcaggtaagtctacaattgcc
aagcttctagcttctttctgggatgtcacttctggtcagatcacctatggtggcttggat
atttgccggcttccgctagactattacagtcagcagattgcttacgtgacccaggataac
tatctttttgacgagactattatggaaaatatccggatgggaaatccagcagcatctgac
gaagaggtcatcgaaattgctcgccgctgcggctgttatgacttcatcatgaacttggaa
gctggctttgaaactcaagtaggctctggcggcggtcatctatctggcggggagcgtcag
cggattgccatcgcccgtgccatgcttaaggatgcgccgattcttattttggatgaagcg
actgcttatacagatccggaaaatgaagcacggattcagtccagtctagctcgtctgatt
gagggacggaccttgattgtcattgcccacaggctgtctacaattatgagtgcagaccag
atagtcctggtcaatgatggtcggattgaagctagaggtcggcatgaagaattgctggta
acaagtccactttatgctttcatgtggcaggcccatattgctaccagggataatagtgag
atggaaggagggctgactcatgcttaa
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